Corynebacterium ulcerans 0102: CULC0102_0996
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Entry
CULC0102_0996 CDS
T02171
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cue
Corynebacterium ulcerans 0102
Pathway
cue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CULC0102_0996 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cue03021
]
CULC0102_0996 (rho)
03019 Messenger RNA biogenesis [BR:
cue03019
]
CULC0102_0996 (rho)
Transcription machinery [BR:
cue03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CULC0102_0996 (rho)
Messenger RNA biogenesis [BR:
cue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CULC0102_0996 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAM27195
LinkDB
All DBs
Position
1043436..1045763
Genome browser
AA seq
775 aa
AA seq
DB search
MFPRMCAFLTHSVEILGHLRHQYLNPVNSTACFPVVVTWLNIFPVTSFSSGKGDERTSVT
TTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAISGAQGGKTAQGGRSTASA
AKHTAQTKSTPKVEKDSAPVENSAAEASKAQQEKADQAPAKEPKTRRRRVLKTTGTTEAA
KDVVSNEPIAQASAPVEEEKPRRRRATRRVETPSEKHGSAESSSQDKADVSADVNDGAAG
AVEHGDADDENRYESRSAARRARRNRARREHREDRQVSQREDNRSENDQNSHDGERRKDA
PVDSVKAEERREASEHQAADQQQVRESRESSDNEHPRQRNGRHHERGERGDRGDRNRRNR
RNRRGRDRDDNRDNTNIEPREDEVLQNIAGILDIVDSNVAFVRTSGYHAGPADVYVNNQM
IRRLGLRAGDAIVGQVRMNGDNSHGGHHGHNRGRNRQKYNPLVRVESVNGMSIEEAKARP
DFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANA
IATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKRLV
EQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLT
IIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLVP
EEARIMHKLRRILAALDNQQAIDLLIKQLKKTKSNGEFLMQIASSAPMAADAEEE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcgtatgtgtgcgttcttaacgcattcggtagagattctcgggcatctacgc
catcagtacctgaatccagttaattccacagcatgctttccagtggtggtcacttggttg
aacattttcccggtgacttctttttcctctggtaaaggcgatgaaaggacatctgtgaca
acaacagataacggcgcacagcgtaatcttgctgcattgcgtctgcccgagctgcgtaag
atcgccgctgaaatgggtctaaaaggcacctctgcactacgcaaaggtgatctcattgcc
gcgattagcggcgcgcaggggggaaagactgcacaaggcggacgtagtaccgcatctgca
gcaaagcacacggcacaaacaaaatctacgccaaaggtggagaaggattctgcacctgta
gaaaactcagctgcagaggcgtctaaggcccaacaagaaaaggctgatcaggctccagct
aaagaaccaaagacacgtcgtcgtcgagtgctgaagacaacgggaaccaccgaggctgca
aaagacgtggtttccaatgagcccattgcacaggcgtctgcgcccgtggaagaagaaaag
ccgcgccgtcgtcgcgcgactcgtcgtgtagaaactccttcagagaagcatggctctgca
gaaagctcctcacaggacaaagcggacgtgtccgctgacgtgaatgatggggcagcggga
gccgtggaacatggcgatgctgatgatgaaaaccgctacgaatcgcgctcagctgctcga
cgcgctcgtcgtaaccgcgctcggcgggagcaccgcgaggaccggcaggtttctcagcga
gaagataatcgctctgagaatgatcagaactcccacgatggggaacgtcgtaaagacgca
cccgttgatagcgtgaaagcagaggaacgtcgggaagcttctgagcatcaggctgcagat
cagcagcaggttcgggaatcccgtgagagctctgacaacgagcatcctcgtcagcgcaat
ggtcgccatcatgagcggggcgagcgcggtgaccgaggtgatcgtaatcgtcggaatcgc
cgtaaccgacgcggtcgtgatcgtgacgataaccgagataacaccaacattgagcctcgt
gaagacgaagttttgcagaacatcgccggcatcctcgacatcgtggatagcaatgtcgct
tttgttcgcacgtcgggttaccatgctggccctgcagacgtctacgtgaataaccagatg
attcgtcgcttgggcctacgtgccggcgatgccatcgttggccaggttcggatgaatggc
gataatagccatggtggacatcatgggcacaaccgtggacgcaaccgtcaaaagtacaac
ccgttggttcgcgttgaatctgtcaacggcatgtccatagaggaagctaaggcacgtccg
gacttctctaagctcacgccgctgtacccgaaccagcgactgcgtttggaaaccgaacca
aagatccttaccactcgtgtgatcgacttgatcatgcctattggtaaaggtcagcgtgcg
cttatcgtgtctccgccgaaagctggtaagactacgattttgcagaacatcgctaacgcc
atcgccacaaataaccctgagtgctacttgatggtggtgcttgtcgacgagcgtcccgag
gaagtcaccgacatgcagcgctccgtcaagggcgaggttattgcctccaccttcgatcgt
ccgccaagcgagcataccgctgtagctgagttggcaatcgagcgtgctaagcgactcgta
gagcaagggcaagatgtcgtggtgctcctcgattccatcacgcgccttggccgtgcttac
aacaactcttctcctgcttccggccgtatcctgtccggtggtgtggactcgaatgccctc
tacccaccaaagcgtttcctaggcgcagctcgtaacatcgaaaatggtggctctttgacc
atcatcgctactgcgatggtagaaactgggtctgcaggcgacaccgtgatctttgaggaa
ttcaagggaaccggtaacgcagagctcaagctggatcgcaagatctcggagcgccgcgta
ttcccagcagtggatgttaatccgtcaggaactcgtaaagatgagcttcttctggttcct
gaggaagcccgcatcatgcacaaactgcgcaggattcttgcagccttggataatcagcag
gccatcgatctgctgatcaagcagctcaagaagactaagtccaacggtgagttcttgatg
cagattgcatcgagtgccccgatggctgcagacgctgaggaggagtaa
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