Corynebacterium ulcerans 0102: CULC0102_1611
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Entry
CULC0102_1611 CDS
T02171
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cue
Corynebacterium ulcerans 0102
Pathway
cue03030
DNA replication
cue03430
Mismatch repair
cue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CULC0102_1611 (dnaE)
03430 Mismatch repair
CULC0102_1611 (dnaE)
03440 Homologous recombination
CULC0102_1611 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cue03032
]
CULC0102_1611 (dnaE)
03400 DNA repair and recombination proteins [BR:
cue03400
]
CULC0102_1611 (dnaE)
Enzymes [BR:
cue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CULC0102_1611 (dnaE)
DNA replication proteins [BR:
cue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CULC0102_1611 (dnaE)
DNA repair and recombination proteins [BR:
cue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CULC0102_1611 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAM27810
LinkDB
All DBs
Position
complement(1732232..1735792)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAKKSSFVHLHNHTEYSMLDGMAKVDMLADEVVRQGMPAVGMTDHGNMFGSDAFYRTMKK
AGVKPIIGIEAYMAPDSRFNKTRVRWGEPHQKSDDVSASGAYLHQTMLAENAEGLRNLFY
LSSMASYEGQLGKWPRMDADLIAEHASGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGKENYFLELMDHGLEIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAQAHEAMLC
VQTGKTLSDPDRFKFDGSGYYIKTAEQMREMWDSLVPEACDNTLWIAERVQDYGEIWEEH
THDRMPIADVPEGHTPTSWLRHEVLEGLRVRFNGGEVPQSYIDRAEYEISVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHDLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQALKDSARVQYGQPGYQIADR
ITKELPPAIMAKDIPLSGIMDPEHPRYGEAGEVRNLIETDPDVKKIYDTARGLEGVVRQA
GVHACAVIMASVPLLEHIPMWKRAADGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDC
IENIKINRKETIDLEELATDDPKVYELLSSGDTLGVFQLDSGGMQELLKRMQPTGFHDIV
ASLALYRPGPMGVNAHWDYADRKNGRKPIEPIHPELDEPLREILDETYGLIVYQEQIMRI
SQKVANYTAGEADGFRKAMGKKQPEVLAKQYDKFLEGMLSNGYSKDAVDALWGTIEPFAS
YAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKDKSAIYLSNCRHLGISVLS
PDVNESRLNFLPVGNDIRFGLGAVRNVGEDVVNSIVKARQEKGNFSDFSDYLDKIDTVAC
NKRVTESLIKAGAFDSLGHPRKGLLLIHEDAVDSVISTKKAADKGQFDLFAGFGGDDDSM
SNAFAVQIPEAQWDRKHQLALEREMLGLYVSGHPLDGYEEALEAQTDTPLTTILAGELRN
GAEVQIGGIISSVDRRYSKKDGSPWAIVTIEDHHGAQVDLLVFNKIYAIVGPQIVEDNII
LAKAHISIRDDRMSLFCDDLKVPDLGPGNGAGLPLRLTMRTEQCTMANIARLKDVLANNK
GDSDVYLNIVHGDEATVMILGEHLRVNRTASLMGDLKATMGPGILG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaatcctctttcgtacatctgcacaatcacactgagtattcgatgcttgac
ggcatggcgaaagtggatatgcttgccgacgaagtcgtgaggcagggtatgccagctgtg
ggaatgacagaccacggcaatatgttcggatcggatgccttttaccgaactatgaagaaa
gccggagtaaaaccaattattggtatcgaggcgtatatggctccggattctcgattcaat
aaaacaagggttcggtggggcgagccgcatcagaagtccgatgatgtctcagcctccggc
gcgtatctgcaccaaactatgctggcggaaaacgccgaaggcctccgcaatctcttctat
ctgtcgtcgatggcatcgtatgaagggcagctgggtaagtggccacgcatggacgcagat
ctgatagccgagcacgcctctggcattatcgcaaccacaggctgtccctccggagacgtg
cagactcgtttgcgcctagggcaattcgatcaggcacttgaggccgccgccatgtggcag
gacatttatggcaaagaaaattattttttggagctcatggaccatggtctggagattgag
aatagggttcgttcggagctgctagaaatcggacggaaacttgatcttccaccgttggtg
accaacgactgccactatgttttggagtctcaggcgcaggctcatgaggccatgttgtgt
gtgcagaccggaaagacgttgagcgatcccgaccgattcaagtttgacgggtctggctat
tacatcaagactgcagagcagatgcgggagatgtgggactctcttgtgcctgaggcctgt
gacaacactttgtggattgcagagagagtccaagattacggggagatttgggaggagcat
acccacgaccgtatgcccatcgcagacgttccagaggggcatacgccgacgtcgtggttg
cgtcatgaggttctggaaggcctacgcgttcgctttaacggcggagaggttccgcaatct
tatattgatcgtgcggaatacgagatttcagtgattgatatgaagggttacccttcctac
ttcctcatcgttgccgagctgatcaagcatgctcgatccatcggtatccgagtggggccc
ggtcgtggttctgctgcaggcgctttggtggcatatgcgttgaccattaccaatattgat
ccgatggagcatgacctcctttttgagaggttcttgaacccggagcgaccttccgcaccc
gatatcgatatcgacttcgatgatcgtcgtcgcggcgaaatgatccgttacgctgcggat
cgctggggagaagacaagatcgctcaggtgatcacctttggaacggtgaaaaccaaacag
gcgctcaaagactcggctcgtgtgcagtacggtcagcctggttatcagatcgctgatcgc
attactaaagagcttcctcccgcgattatggctaaagacattccgctatccgggattatg
gatcccgagcatccccggtacggggaagctggggaagtccgaaacctcatcgagacagac
cctgacgttaaaaaaatctatgacactgctcgtggactagaaggtgtagtgcgccaagca
ggtgtccatgcttgtgccgtgattatggccagcgtgccgttgttggagcatattccgatg
tggaagcgtgctgcagatggggcgctcattacaggatggccgtatcctgcatgtgaggct
attggtctgctgaagatggacttcttagggctgcgtaaccttactgttatcggtgactgc
atcgagaacatcaagattaaccggaaagagacgattgatcttgaggaactagccacggat
gaccccaaggtgtatgaactgctgtccagtggcgatacgctcggtgttttccagctcgac
tcgggcggcatgcaagaactactcaaacgaatgcagcccacgggcttccacgacatcgtg
gcgtctttggctctgtatcgtccaggacccatgggtgtgaatgcgcactgggattatgct
gaccgcaagaatggccgtaaacccattgaacccattcaccctgagcttgacgagccgctg
cgtgagattcttgatgagacttatggcctcatcgtttatcaagagcagatcatgcgtatt
tcccaaaaggtagctaattacacagctggtgaagctgatgggttccgtaaagcgatgggc
aagaagcagcctgaagtattggctaagcaatacgacaagttcttagagggaatgctatcc
aatgggtattccaaggacgctgtggatgcactgtggggcaccattgaacccttcgcatcc
tacgcgttcaataaatcccacgccgcagggtatggcctagtttcttattggactgcgtat
ctgaaagcaaactacacggctgagtacatggcggcgctactgacctctgttgcggataaa
aaagacaagtctgccatttatctatctaactgtaggcacctgggcatatcggtgctctca
ccggatgttaacgagtctcgtttgaacttcctgccagtaggaaacgatatccgctttggt
ttgggagctgtgcgtaacgttggagaggacgtagttaattcgatcgttaaagcgcgtcag
gaaaaaggcaacttctcggatttttcggattatctggacaaaatcgataccgttgcgtgc
aataaacgcgtgacagaatcgttgatcaaggctggtgcttttgattccttggggcacccg
aggaaaggcttgttgctgatccacgaggatgcagttgattccgtcattagcactaaaaaa
gcggcggacaaagggcaatttgacctctttgccgggttcggtggcgatgacgactcaatg
agcaacgcttttgccgtgcagattccagaagcgcaatgggatagaaagcaccagctcgcc
ctagaacgagagatgcttggactgtatgtttctgggcatccgcttgatggatacgaggaa
gcactagaagctcagacagatacaccgctgacaacgatccttgccggggagctgcgcaac
ggtgcagaggtacaaatcggcggcattatttcgagcgttgatcgtcgttactctaaaaaa
gatggctctccgtgggcgatcgtaaccattgaggatcaccatggtgcccaggtagacctg
ctggtgtttaacaagatctatgcgatagttggaccccagatcgtagaagacaacatcatc
ctggccaaggcgcacatctcaatccgtgatgatcgtatgtcccttttctgcgatgatctc
aaagtgcctgatctcggccctggcaatggtgctgggcttcctctccgattgaccatgcgt
acagagcaatgcaccatggcaaacattgcacgtctaaaagacgtactggctaataacaag
ggcgattctgatgtgtacctcaacatcgtccatggtgatgaggccactgtgatgattctt
ggggagcatttacgagttaatcgcacagcaagcttaatgggcgatctgaaggccacgatg
gggccgggaatccttggataa
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