Curtobacterium aetherium: KM842_07600
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Entry
KM842_07600 CDS
T10177
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cuf Curtobacterium aetherium
Pathway
cuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KM842_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuf03019
]
KM842_07600
03400 DNA repair and recombination proteins [BR:
cuf03400
]
KM842_07600
Enzymes [BR:
cuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KM842_07600
Messenger RNA biogenesis [BR:
cuf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KM842_07600
DNA repair and recombination proteins [BR:
cuf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KM842_07600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
KORA
Motif
Other DBs
NCBI-ProteinID:
QWS35137
LinkDB
All DBs
Position
1673273..1675372
Genome browser
AA seq
699 aa
AA seq
DB search
MAAEAQEALQALTGRPEAVFHPGQLEAISALVEHRQRALVVQRTGWGKSAVYFLATLLLR
RRGGGPTVLVSPLLALMRDQVAAAARAGVRAVSINSANAHEWSETQAALARDEVDVLLVS
PERLNNPKFRDEQLPALIGRMGMLVVDEAHCISDWGHDFRPDYRRLAELIRSLPHGVPVL
ATTATANERVVEDVAEQLTAGPEDPVFTIRGSLARASLRLGVLTLPDARARLGWLLAHLG
DLPGSGIIYTLTVSAAEDIARLLRESGYAVRAYTGRTDNEEREQLEAQLKGNELKALVAT
SALGMGFDKPDLGFVVHIGAPSSPVAYYQQIGRAGRATDNADVLLLPGREDQEIWQYFAS
ASMPTESRASAVLGALSPDAAMSTVALEGLVDIKRSTLELLLKVLDVDGAVRRVGGGWVT
TGRPWEYDAVRYERVAAARAAEAASMLTYESTSACRMQLLQQDLDDPTAEPCGRCDNCAG
AWYPTDVSEADRSGAADALDQVGVEIAPRAQWPSGMASLGVAVKGKIPAGELVAPGRAVA
RLTDLGWGGPLRALFATGTSDAPVSRELVDGCVRALKDWPWEVRPTGVVAMSSRSRPQLV
GSLAQALSSIGRLQHLGTLERDGGVPRGDGATNSAYRLSGVWDTFVVGPELAAGLQAHHG
PVLLVDDLVDSRWTMTVAGRELLRAGASAVLPFALATVA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atcgccgcggaggcgcaggaggcgctgcaggcgctcaccggccgccccgaagccgtcttc
caccccggacaactcgaggcgatctcggcactcgtggagcaccggcagcgcgcgctcgtg
gtgcagcgcaccgggtggggcaagtccgccgtctacttcctcgcgaccctgctgctccgg
cgccgcggcggcggtccgaccgtgctggtgtccccgctgctcgcgctcatgcgggaccag
gtggcggcggctgcccgtgccggggtccgggcggtgtcgatcaactcggcgaacgcgcac
gagtggtccgagacccaggcggcgctcgcccgtgacgaggtcgacgtgctcctcgtctcc
cccgagcggctgaacaacccgaagttccgcgacgagcagctgcccgcactgatcgggcgg
atggggatgctcgtcgtcgacgaagcgcactgcatctccgactggggccacgacttccgc
ccggactaccggcggctcgccgagctcatccggtccctgccgcacggcgtgccggtcctg
gcgacgaccgcgaccgccaacgaacgcgtggtcgaggacgtcgccgagcagctcaccgcc
ggccccgaggacccggtgttcaccatccgcggttcgctcgcccgcgcctccctgcgcctc
ggcgtcctcaccctgcccgacgcccgcgcccggctcggctggttgctcgcgcacctcggc
gacctgcccggcagcgggatcatctacacgctcacggtctcggcggccgaggacatcgcc
cgcttgctgcgcgagtccgggtacgccgtccgcgcctacacgggccgcaccgacaacgag
gaacgcgagcagctcgaagcacagttgaagggcaacgagctcaaggccctcgtcgcgacc
agcgcgctcggcatggggttcgacaagcccgacctcgggttcgtggtgcacatcggcgct
ccgtcctcccccgtcgcctactaccagcagatcggtcgtgcgggacgcgccacggacaac
gccgacgtcctgctgctgcccggtcgcgaggaccaggagatctggcagtacttcgcgagc
gcctcgatgccgacggagtcccgcgcgtctgccgtgctcggcgcgctgtcccccgacgcc
gccatgtcgaccgtggcgctcgaggggctcgtcgacattaagcgttcgaccctcgagctg
ctcctcaaggtgctcgacgtcgacggggccgtccggcgggtgggcgggggctgggtcacc
accggccgcccctgggagtacgacgccgtccgctacgagcgcgtcgccgccgcccgcgcc
gccgaggccgcgtcgatgctgacgtacgagtcgacgagcgcctgccgcatgcagctgctg
cagcaggacctggacgacccgaccgccgagccctgcggccggtgcgacaactgcgccggt
gcctggtacccgaccgacgtctccgaggccgaccgctccggggccgcggacgccctcgac
caggtgggggtggagatcgccccgcgcgcgcagtggccgtccggcatggcgtccctgggg
gtcgccgtcaagggcaagatcccggcaggcgaactcgtcgcacccgggcgggcggtcgca
cgcctcaccgacctcggctggggtggtccgctccgcgcactgttcgccaccgggacgtcc
gatgcgccggtctcgcgcgaactcgtcgacgggtgcgtccgcgccctgaaggactggccg
tgggaggtccgaccgaccggggtcgtcgcgatgtcctcccgctcccggccacagctcgtc
ggctccctcgcgcaggcgctgtcgtcgatcggtcggctgcagcacctgggcacgctcgag
cgtgacggcggcgtcccccgtggcgacggcgcgacgaacagcgcctaccggttgtccggc
gtgtgggacaccttcgtggtcggacccgaactggccgccgggctccaggcgcaccacggg
ccggtgctgctcgtggacgacctggtcgacagccggtggacgatgacggtcgcggggcgc
gaactcctgcgcgccggagcgtcggcggtgctgccgttcgccctggccaccgtcgcctga
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