Curtobacterium aetherium: KM842_14925
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Entry
KM842_14925 CDS
T10177
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cuf Curtobacterium aetherium
Pathway
cuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KM842_14925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuf03019
]
KM842_14925
03400 DNA repair and recombination proteins [BR:
cuf03400
]
KM842_14925
Enzymes [BR:
cuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KM842_14925
Messenger RNA biogenesis [BR:
cuf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KM842_14925
DNA repair and recombination proteins [BR:
cuf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KM842_14925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
Cas3-like_C_2
THOC2_N
Motif
Other DBs
NCBI-ProteinID:
QWS33504
LinkDB
All DBs
Position
complement(3214763..3216394)
Genome browser
AA seq
543 aa
AA seq
DB search
MQNELRTRTAEVFGWELRDAQETVVDAVLEGRDALALMPTGSGKSAIYQVAALALDGPVV
VVSPLVALQEDQVVGIEDHPDAPRAVTINATRAHRELEDAWDAVASGEARYVFLAPEQLA
KDEVVDRLRDAGVALVTVDEAHCVSSWGHDFRPDYLVLGEVVERLGCPPVLAMTATGSTP
VRAEIVERLGMRDPLVVATGFDRPNLRFEVQRHTDEDEKREAVIAQVAGLEGAGIVYVAT
RAETLVYADELVERGRRAKAYHAGLRVRDREHVHHEFLDGDLDVVVATSAFGMGIDKPDV
RFVVHADVPESVDAYYQEVGRAGRDGDVGLATLHYRSEDLGLRRFFASGSPRPASLRAVF
DAVPADGSIARSEVAGRSGLAARTTGRVVNALVDAGALVDDRDGLRRTADGPRDAEAAAA
LAKDHAKERERVEESRIEMMRRFAETSGCRRQFLLGYFGDELPEPCGNCDTCTAGTATGA
DAHGADGSHDAEWPPDAPVEHAEWGRGTVMSTEDDRVTVFFESAGYRTLGLADVTERHLL
ERV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaacgaactccgtacccgtaccgccgaggtcttcggttgggaactccgcgacgcg
caggagaccgtggtcgacgccgtcctcgagggccgcgacgccctcgccctcatgccgacc
ggctcgggcaagtccgcgatctaccaggtcgccgccctcgcactggacggccccgtcgtc
gtggtctcgcccctcgtggccctgcaggaggaccaggtcgtggggatcgaggaccacccg
gacgcaccccgcgcggtgacgatcaacgcgacccgggcgcaccgcgagctcgaggacgcg
tgggacgccgtcgcctccggggaggcccgctacgtcttcctcgcgccggagcagctcgcc
aaggacgaggtcgtcgacaggctccgggacgccggcgtcgcgctcgtcaccgtcgacgaa
gcacactgcgtgtcgagctggggccacgacttccgcccggactacctcgtgctcggcgag
gtcgtcgagcgcctgggctgcccgccggtgctcgccatgaccgcgaccggttcgacgccg
gtgcgcgccgagatcgtcgagcggctcggcatgcgcgacccgctcgtggtcgccacgggc
ttcgaccgtccgaacctgcgcttcgaggtgcagcggcacacggacgaggacgagaagcgt
gaagccgtcatcgcccaggtcgcggggctcgagggtgccggcatcgtctacgtcgccacc
cgcgccgagaccctcgtgtacgccgacgaactcgtcgagaggggccgacgggcgaaggcc
taccacgcggggctccgggtgcgggaccgcgagcacgtgcaccacgagttcctcgacggc
gacctcgacgtcgtcgtcgccacgagcgcgttcggcatgggcatcgacaagccggacgtc
cgcttcgtcgtgcacgccgacgtgcccgagtccgtcgacgcgtactaccaggaggtcggt
cgtgccgggcgggacggggacgtgggcctcgcgacgctgcactaccgctccgaggacctc
ggactccgccgcttcttcgcctcggggtcaccccgaccggcgtcgctccgggccgtgttc
gacgcggtgcccgccgacggcagcatcgcccgctccgaggtcgccggacggtccggcctc
gccgcacgcaccaccggccgcgtcgtgaacgccctggtcgacgccggtgcgctcgtcgac
gaccgggacggcctgcgccgcacggcggacgggccgagggacgccgaggcggcggccgcg
ctcgcgaaggaccacgcgaaggagcgggagcgcgtcgaggagtcccgcatcgagatgatg
cggcgcttcgccgagacgtccgggtgccgccgccagttcctgctcggctacttcggggac
gagctgcccgagccctgcggcaactgcgacacgtgcacggccggcaccgcgaccggggcc
gacgcgcacggcgccgacgggtcgcacgacgccgagtggccgccggacgcccccgtcgag
cacgccgagtggggtcgcggcacggtcatgagcacggaggacgaccgcgtgacggtgttc
ttcgagtccgccggctaccgcacgctcggcctggccgacgtcacggaacgacacctgctc
gaacgggtctga
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