Curtobacterium sp. SGAir0471: C1N91_01405
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Entry
C1N91_01405 CDS
T05978
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cug
Curtobacterium sp. SGAir0471
Brite
KEGG Orthology (KO) [BR:
cug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cug03016
]
C1N91_01405
Enzymes [BR:
cug01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
C1N91_01405
Transfer RNA biogenesis [BR:
cug03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
C1N91_01405
Prokaryotic type
tRNA splicing ligases
C1N91_01405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QCR42396
LinkDB
All DBs
Position
274233..275399
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AA seq
388 aa
AA seq
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MQKITDRLLSWASMLEENTEQQARTTARMPFVFPHLALMPDAHLGLGATVGSVIPTLGAV
MPAAVGVDIGCGMIAVRTQFGKADLPSDLQPLREQIERAVPLSAGASNRKVVATAEPRIA
ELETMAEAAGFDPAGAHGGWRNQLGTLGSGNHFIEVSLDEQDRVWLFLHSGSRGVGNKIA
QRHIAVAKRMMQRWWIELPDPDLAYLVEGTPEFDRYIAELRWAQHFALLNREEMMDRVVR
QLSEVLGQPVDEQERINCHHNFTQRETHWGKSVWVSRKGAIQATAGQPGLIPGSMGTASY
VVEGLGNKPSLESSPHGAGRLFSRSAARRTFTHEQLREAMAGIEYRDTDAFLDEIPAAYK
PIDQVMADAADLVAIRHTLRQVVNVKGD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaagatcaccgaccgattgctcagctgggcctcgatgctcgaggagaacaccgag
cagcaggcccgcacgacggcccgcatgccgttcgtgttcccgcacctcgcactgatgccc
gacgcccacctggggctcggcgccaccgtgggttccgtcatcccgaccctcggtgcggtg
atgcccgcagccgtcggcgtcgacatcggctgcggcatgatcgcggtccgcacacagttc
gggaaggccgacctgccgagcgacctgcagccgctgcgtgagcagatcgagcgcgccgtc
ccgctgtcggccggagcgtcgaaccgcaaggtcgtcgccaccgccgagccgcggatcgcc
gagctcgagacgatggccgaggccgccggcttcgaccccgccggggcacacggcggctgg
cggaaccagctcggcacgctcggctcgggcaaccacttcatcgaggtctcgctcgacgag
caggaccgggtctggctgttcctgcactccggctcgcggggcgtcggcaacaagatcgcc
cagcggcacatcgcggtcgcgaagcggatgatgcagcgctggtggatcgagctgccggac
cccgacctggcctacctcgtcgagggcacgccggagttcgaccggtacatcgccgagctc
cgctgggcgcagcacttcgccctgctcaaccgcgaggagatgatggaccgcgtcgtccgg
cagctgtccgaggtgctcgggcagcccgtggacgagcaggagcggatcaactgccaccac
aacttcacgcagcgcgagacgcactgggggaagagcgtgtgggtgtcccgcaagggggcg
atccaggcgacggcggggcagcccggcctcatcccggggtcgatgggcaccgcgtcgtac
gtggtcgaggggctcggcaacaagccttcgctcgagtcctcgccgcacggggccggacgc
ctgttctcgcggtccgctgcccggcggaccttcacgcacgagcagctgcgcgaggcgatg
gcggggatcgagtaccgcgacaccgacgcgttcctcgacgagatccccgcggcgtacaag
ccgatcgaccaggtgatggcggacgccgccgacctggtcgcgatccggcacacgctgcgg
caggtcgtcaacgtcaagggtgactga
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