Curtobacterium sp. SGAir0471: C1N91_03250
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Entry
C1N91_03250 CDS
T05978
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cug
Curtobacterium sp. SGAir0471
Pathway
cug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N91_03250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cug03019
]
C1N91_03250
03009 Ribosome biogenesis [BR:
cug03009
]
C1N91_03250
Enzymes [BR:
cug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C1N91_03250
Messenger RNA biogenesis [BR:
cug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1N91_03250
Ribosome biogenesis [BR:
cug03009
]
Prokaryotic type
rRNA helicases
C1N91_03250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
adh_short
HEM4
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QCR44965
UniProt:
A0A4P8SW35
LinkDB
All DBs
Position
685162..686976
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AA seq
604 aa
AA seq
DB search
MVTFADLGLSDPVLKAVKDIGYETPSAIQEATIPTLLEGRDVVGLAQTGTGKTAAFALPI
LSRMESGSKVPQALVLSPTRELALQVCEAFEQFASHMKHVHVLPVYGGQAYGVQLSALRR
GVDVVVGTPGRIMDHIAKGTLDLSELKYLVLDEADEMLKMGFAEDVETILAETPDDKQVA
LFSATMPAQIRRISQQYLTDPSEITVKTKTKTAANITQRYLMVSYPQKVDALTRILEVED
FEGMIIFVRTKSETETLAEKLRARGYAAAAISGDVAQAQRERTVNQLKTGKLDILVATDV
AARGLDVDRITHVVNFDIPVDIESYVHRIGRTGRAGRKGDSISFVTPRERRLLSAIERHT
KQPLTQMQLPTIEDVNETRLSRFDDAITAALEQHDRIEKFRDVIAHYVRNHDVPAEDVSA
ALAVVAQGDSPLLLDPNEDQLRNQVDRDGRRGERRDRDDDRGGREDRGPRRSQPMTAYRI
EVGRRHRVEPRQIVGALANEGGLRRDDFGAIQIRPDFSIVELPESMDPGVLDRLSDTRIS
GKLIEIKPDRRGGARRYDRDDRGPRGPRRDDRGPRRDDDRPRRDDRRDDRPRYDDDRPAR
KPRH
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaccttcgccgacctcggcctgagcgacccggtgctcaaggccgtcaaggacatc
ggctacgagaccccctccgccatccaggaagcgacgatcccgacgctgctcgaggggcgc
gacgtcgtcggcctcgcgcagaccggtaccggcaagaccgcggcgttcgcgctgccgatc
ctgtcccgcatggagtcgggcagcaaggtgccgcaggcgctcgtgctgtcgccgacccgc
gagctcgcgctccaggtgtgcgaggcgttcgagcagttcgcgtcgcacatgaagcacgtg
catgtcctgcccgtctacggcggccaggcgtacggggtccagctgtccgccctgcgccgt
ggcgtcgacgtcgtcgtcggcacgcccggtcgcatcatggaccacatcgccaagggcacg
ctcgacctgtccgagctgaagtacctcgtgctcgacgaggccgacgagatgctcaagatg
ggcttcgccgaggacgtcgagacgatcctcgccgagacgcccgacgacaagcaggtcgca
ctgttctcggcgacgatgcccgcgcagatccgtcgcatctcgcagcagtacctgaccgac
ccgtccgagatcacggtcaagaccaagacgaagaccgccgcgaacatcacgcagcgctac
ctgatggtgtcgtacccgcagaaggtcgacgcgctcacccgcatcctcgaggtcgaggac
ttcgagggcatgatcatcttcgtccgcaccaagagcgagaccgagaccctggccgagaag
ctccgcgcccgcgggtacgccgcggctgccatcagcggtgacgtcgcgcaggcgcagcgc
gagcgcacggtcaaccagctcaagacgggcaagctcgacatcctcgtcgccaccgacgtc
gccgcccgtggtctcgacgtggaccgcatcacccacgtcgtgaacttcgacatccccgtc
gacatcgagtcctacgtccaccgcatcggccgcaccggtcgcgcgggccgcaagggtgac
tcgatcagcttcgtcaccccgcgcgagcgccggctgctctcggccatcgagcgccacacc
aagcagccgctcacgcagatgcagctcccgacgatcgaggacgtcaacgagacgcgcctg
agccgcttcgacgacgcgatcaccgcggcgctcgagcagcacgaccgcatcgagaagttc
cgcgacgtcatcgcgcactacgtccgcaaccacgacgtcccggcggaggacgtctcggct
gcgctcgcggtggtggcgcagggcgactcgccgctgctgctcgacccgaacgaggaccag
ctccgcaaccaggtcgatcgcgacggtcgtcgtggtgagcgccgtgaccgggacgacgac
cgtggtggccgtgaggaccgcgggccgcgccgttcgcagccgatgaccgcgtaccgcatc
gaggtcggtcgtcggcaccgggtcgagccgcgccagatcgtcggcgcgctcgcgaacgag
ggcggactgcgccgcgacgacttcggcgcgatccagatccgaccggacttctcgatcgtc
gagctgcccgagagcatggaccccggcgtgctcgaccgcctgtcggacacccggatcagc
gggaagctcatcgagatcaagccggaccgccgcggtggtgcccgtcggtacgaccgcgac
gaccggggtccgcgtggcccccgtcgagacgaccgtggtccgcgtcgcgacgacgaccgt
ccgcgccgtgacgaccggcgtgacgaccgtccccgctacgacgacgaccgtccggcacgc
aagccgcgccactga
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