Curtobacterium sp. SGAir0471: C1N91_04955
Help
Entry
C1N91_04955 CDS
T05978
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cug
Curtobacterium sp. SGAir0471
Pathway
cug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N91_04955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cug03019
]
C1N91_04955
03009 Ribosome biogenesis [BR:
cug03009
]
C1N91_04955
Enzymes [BR:
cug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
C1N91_04955
Messenger RNA biogenesis [BR:
cug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C1N91_04955
Ribosome biogenesis [BR:
cug03009
]
Prokaryotic type
rRNA processing factors
C1N91_04955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
QCR42986
UniProt:
A0A4P8SPM8
LinkDB
All DBs
Position
1076663..1079680
Genome browser
AA seq
1005 aa
AA seq
DB search
MVEQNTDNPNNEEVAPKRRGRLFGSRRARSTGQEARGDVDTDTSGVETVALTGDAPDAES
AAAGETAADETVEQETAPADGAVEVAVEQVPAAAAEPQDVSTVTGSLPVVEEAGATAPTD
DVAAEAAGAPAAADSDEVTTVSEPAAAVATDADDASGASRPEPASAPEADEPFVPKATST
LSLIFHAPVLPDLPVRAARDEDDDEDDEQGGSRRRSRRRGSSADRQERGVREPRDHQEPR
RREPELITEPQRIKGSTRLEAKKQRRRDGRDAGRRRTVITEDEFLARRESVDRQMIVRSS
SSKIEIGVLEDNVLAEHYVTKSHNVSLIGNVYLGKVQNVLPSMEAAFVDIGRGRNAVLYA
GEVDWNSVDTGNHGRRIEAALKPGDKVLVQVTKDPVGHKGARLTSQVSLPGRYLVYVPNG
SMNGISRKLPDTERARLKKILKEVLPEHAGVIVRTAAEGATEEQLTRDVQRLTSQWEAIQ
KKVQNGHAPVMLHSEPDLLVKIVRDVFNEDFTKLIIDGDAARGTIEDYLDAVAPDLKDRV
EIYDGPDSFEEYRLNEQIEKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGNLE
ETVTKNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLVECLSRDRTKHQV
AEVTSLGLVQMTRKKIGVGLRESLDEVNAKVNDNNADPGPSKSRRKGRGGNGSTGGNGNG
QGGTGHAGNGGSGNGSAAQSSQAHQITEDVKNALSRIAASTLPHDEASSGTPVTGVASPR
GGAATPEAEAGVSSAADAPASSASPVSAPERGSEGATGAGDRDSEQPSGSKRRRRRGGRG
AGSAAPEQRGDDERGAHEHGTERGAEERAVERVADDAVPDRDARAGTSASGAAPARGTAP
EAPAQDPAPAKTAPARRRVSSSAPVTPTENTVAILDIPVAVTKREPRPSRDDAESLLDSV
LQALPEPKQPGQGRSRSRRVSSPSISAPATSDGDGQDDGSVMVGN
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcagaacaccgacaacccgaacaacgaagaagtcgcaccgaagcgccgaggc
cgcctgttcggcagccgtcgcgcccggtccaccggccaggaggcccgtggtgacgtcgac
accgacacctcgggtgtcgagacggtcgcgctgaccggcgacgcaccggacgcggagagc
gctgcggctggcgagaccgcggctgacgagaccgtcgagcaggagaccgcgccggcggac
ggcgccgtcgaggtcgcggtcgagcaggtcccggccgccgctgcggagccccaggacgtg
tcgacggtcacgggcagcctgcccgtcgtcgaggaggcgggcgccacggcaccgacggac
gacgtcgctgccgaggcagccggcgcgcccgcggcggccgactcggacgaggtgaccacc
gtgtccgagcccgccgctgcggtggcgacggacgcggacgacgcgagcggtgcctcccgg
ccggagcccgcctccgcgcccgaggcggacgagcccttcgtgccgaaggcgaccagcacc
ctcagcctgatcttccacgcgccggtcctgccggacctgccggtccgcgccgcgcgcgac
gaggacgacgacgaggacgacgagcagggcggcagccgccgtcgctcgcgacgtcgtggc
agcagcgcggaccgccaggagcgcggcgtccgcgagccccgcgaccaccaggagccgcgc
cgccgcgagccggagctcatcaccgagccgcagcgcatcaaggggtcgacccgactcgag
gcgaagaagcagcgtcgtcgcgacggccgtgacgccggtcgccgtcgcacggtgatcacc
gaggacgagttcctcgcccgtcgcgagagcgtcgaccgccagatgatcgtgcggtcgagc
tcgtcgaagatcgagatcggcgtgctcgaggacaacgtcctcgccgagcactacgtcacc
aagtcgcacaacgtctcgctcatcgggaacgtctacctcggcaaggtgcagaacgtgctg
ccctcgatggaggcggcgttcgtcgacatcggtcgcggccgcaacgccgtgctgtacgcc
ggtgaggtcgactggaactcggtcgacaccggcaaccacggccgtcgcatcgaggccgcg
ctcaagccgggcgacaaggtcctcgtgcaggtcacgaaggacccggtcgggcacaagggc
gcgcgcctgacctcgcaggtctccctgccgggccgctacctcgtctacgtgccgaacggc
tcgatgaacggcatctcgcgcaagctgcccgacaccgagcgcgcgcgcctgaagaagatc
ctcaaggaggtcctgccggaacacgcgggcgtcatcgtccgcaccgcggcggagggtgcg
accgaggagcagctcacccgcgacgtgcagcgcctcaccagccagtgggaggcgatccag
aagaaggtgcagaacgggcacgccccggtgatgctgcactcggagccggacctgctcgtc
aagatcgtccgtgacgtcttcaacgaggacttcacgaagctcatcatcgacggcgacgcg
gcccgcgggacgatcgaggactacctcgacgccgtcgcgcccgacctcaaggaccgcgtc
gagatctacgacggcccggactcgttcgaggagtaccgcctcaacgagcagatcgagaag
gccctggaccgcaaggtctggctgccctcgggtgggtcgctcgtgatcgaccgcaccgag
gccatgacggtcgtcgacgtcaacacgggcaagttcgtcggctccggcggcaacctcgag
gagaccgtcaccaagaacaacctcgaggcggccgaggagatcgtccggcaactccgcctg
cgtgacatcggcggcatcatcgtcatcgacttcatcgacatggtgctcgagtcgaaccgc
gacctggtgctccgtcgactcgtcgagtgcctgagccgcgaccgcacgaagcaccaggtg
gccgaggtcacctcgctcgggctcgtgcagatgacccgcaagaagatcggtgtcggcctg
cgcgagtcgctcgacgaggtcaacgccaaggtcaacgacaacaacgcggaccccggcccc
tcgaagtcgcggcgcaagggccgcggtggcaacggctccaccggcggcaacggcaacggc
cagggaggcaccgggcacgccggcaacggcggctccggcaacgggtcggccgctcagtcg
tcgcaggcccaccagatcaccgaggacgtcaagaacgcgctgtcccgcatcgcggcctcg
acgctgccgcacgacgaggcgtcgtccggtacaccggtgaccggtgtggcgtcgccgcgc
ggcggtgccgcgacgccggaggccgaggccggtgtgtcctcggctgccgacgcacccgcg
tcgagcgcctccccggtctccgcgcccgagcgcgggtcggagggcgccaccggcgcggga
gaccgtgacagcgagcagccgtccggctccaagcgtcgtcgccgccgtggtggtcgtggt
gccggcagtgctgcacccgaacagcgcggggacgacgagcgcggtgcccacgagcacgga
accgagcgtggggccgaggagcgtgccgtcgagcgtgttgccgacgacgccgtgccggac
cgcgacgctcgtgccgggacctcggcgtccggggcggctccggcgcgggggaccgctcca
gaggcgcccgcgcaggacccggctcccgcgaagaccgcgccggcccgtcgccgcgtgagc
tcgagtgctcccgtcaccccgaccgagaacaccgtcgcgatcctcgacatcccggtggcc
gtgaccaagcgtgagccccgaccgtcccgcgacgacgccgagtcgctgctcgactccgtg
ctgcaggcgctcccggagcccaagcagccggggcagggccgttctcggtcgcgccgcgtg
tcgtcgccgagcatcagcgcgccggcgacgtccgacggcgacgggcaggacgacggctcc
gtgatggtggggaactga
DBGET
integrated database retrieval system
