Cupriavidus necator NH9: BJN34_01965
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Entry
BJN34_01965 CDS
T05121
Name
(GenBank) very short patch repair endonuclease
Organism
cuh
Cupriavidus necator NH9
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Ortholog
Paralog
GFIT
Motif
Pfam:
MTES_1575
AAA_11
AAA_30
AAA_12
AAA_19
nSTAND3
DUF559
NAT10_TcmA_helicase
ResIII
AAA_16
UvrD-helicase
AAA_25
nSTAND_NTPase5
SLFN-g3_helicase
MeaB
NPV_P10
CbiA
AAA
Motif
Other DBs
NCBI-ProteinID:
AQV92656
UniProt:
A0A1U9UIQ1
LinkDB
All DBs
Position
1:416780..421369
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AA seq
1529 aa
AA seq
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MSTTPRELLHRLFVYIEEQLKDIDPRAFQIGKSALPRLFPKDLANLPGVFFDVQEEGDHV
WLKVERLEEVAPPVPDSEKYGKAIRIDADPNGKPPQLLEAALDTLIRTAQKDAPEAEHPV
LAERLRAEAEEALIASVSKWQEWAAREKPRRRTISLYSDIFALRHQLHAEQTANPVEFVW
GVGLASWKLSFEGKPFDFQYPLLTQPLEISLDGESMSLEVRPRATEPGCEMDGFVACGIQ
GASECEKAIFEQLSRHRDTPVSPFSASSYADALKLVARNLDSRGSYVEVLAKGEDAPAAG
EHLVVSDSWVVFTRPKSNNFLVADLKNIRSKLEAGCEIPDGPLALVTPPSDTPLDYHAVN
FRGLSGRGTGSEGGTGETKELYFPLPYNQEQVTIVQRLERAPGVTVQGPPGTGKTHTIAN
IICHYLATGKRVLVTSKGEPALEVLQGKIPKEVQPLTVALLAGDRDGIRQFQASIEAIQH
QVSQLNPEATRDEIDRIHRAIDRTHHELVSIDRRVDEIAMQQLAETPVEAASYRAEELAE
LVVKGAPQYAWFDDELSLEPRHAPPLSTEEAARLREDRRQLGEDLAYLAAELPSPDELPQ
PADIAQLHTHLCKLKSLDAATQTGEIPPLRAITPEVLQSARTLLAQLGDAQAELKAMAEA
EAEWPGVLRRKCAQPSYATEVGALVALFDDATRLVEARSAFMKRPVEFPSEALAHPKTVE
AVGRAASTGKPFGFVAIGAGEAKEHIAKVKVNGLVPASTDDWQHVQSYLKLHEQVLSFSS
RWNPVAEVLELPSLMGGVAHLRMLELVTAAARKAHSMATKFDVLLHRAAEAVFARAPANL
ACGSNEDYEVVRGHIMQHLTRAELAEAVIALSQLQERLAGKSGPVTQKLQDYVDQSLGNP
EKDSARVAADYTELVVELRRVCGLAQVIGRVKEFAARLYQAGGANIAGRVSYVPVANGVE
DSAFPASWREAWNWARMRTHLDKIEARKELVELNARRTDLEAALAQMYKDVVGKAAWLAT
KRNASPKVLQALAGYATAIRRIGKGTGPNAVRYRRDAQQSMLDAAGAVPCWIMSHAKISE
SMPADIGAFDLVIVDEASQSDLWALPAIVRAKKVLVVGDDKQVSPDGSFVSSAEIDELRA
RFLSEQPYGQDMTPEKSLYDLAARVFAADQVMLREHFRCVPPIIAYSNQFYKGAIQPLRI
PLASQRLDPPLVDIYVPGGMRDRHDCNRLEAEAISAEINAILEDERYAGRTIGVVSLLGM
EQAKFIDAMVRERCSASELLRREFDCGDARTFQGSERDIMFLSMVADPERCHPLSGNAYD
QRFNVAGSRARDRMYLVRSVTAEQVSDKDIRMTLLEHFSNPKVPQGEDDQEGLIKLCESG
FEREVFTLLVQRGYRVIPQVKSGAYRLDMVVEGANDARLAVECDGDAYHGPDRWPSDMNR
QRILERAGWTFWRCFASTWCLRKEEVFEELVERLTAMGIEPIGAVAALPRLVESRTWTPP
AARATPDAIDDVVDAAIAAAKASTVEQPQ
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgtccactacgccgcgcgagctgcttcaccgcctgttcgtctacatcgaggaacagctc
aaagacatcgacccccgagcatttcaaataggaaaatcggcccttccgcggctctttccc
aaagacctggccaacttgccaggcgtcttctttgatgtccaggaggagggagaccacgtc
tggctaaaggttgagcgcttggaagaggtcgcgccgccggtgccggactctgagaaatat
gggaaagctattcgcatcgacgcggacccgaacggtaagccgccacagcttcttgaagcc
gcgctcgacacgttgattcgcaccgcgcagaaggatgctccggaggcggagcaccctgtc
ttggccgaacgccttcgtgctgaagcagaggaagctctcatcgcttctgtcagcaagtgg
caggagtgggcggcgcgcgagaagccacggcgcaggaccatttcgctttacagcgacatc
tttgcccttcggcatcaattacacgccgagcagacggcgaacccggtcgaattcgtctgg
ggtgtgggattggccagctggaagctcagcttcgaggggaagccattcgacttccagtac
ccgctgctgacccaaccgcttgaaatctccctggacggggaatccatgtccctggaagta
cgcccgcgtgccaccgagccgggctgcgaaatggatggattcgtcgcgtgtggcattcaa
ggggcttccgagtgcgagaaggcgatattcgaacagctctctcggcacagggacacaccg
gtatcgccattctcggcctcaagctacgccgacgcgctcaaacttgtcgcccgtaacttg
gacagccggggtagctatgtggaggtcctcgccaagggcgaagacgcgccggcggccggg
gaacacctggtggtcagcgactcttgggtagtgttcacgcgtccgaagtcgaacaacttc
ctggtcgccgatttgaagaacattcgcagcaagctggaagccggctgcgaaattcccgat
ggtccgctggcgctggttacgccgccatcggatacgccactcgactaccatgcggtgaac
ttccgcggtctctccgggcgtggcactggaagcgagggcggcactggtgaaaccaaggag
ctgtatttcccgctgccgtacaaccaggaacaggtcaccatcgtacagcggctggagcgc
gcccccggtgtgacggtgcaaggcccgccgggcactggcaagacgcacaccatcgcgaac
atcatctgccactacctggctacgggcaagcgggtgctggtaacgtcgaagggcgaacca
gcccttgaggtcttgcaggggaaaattcccaaggaagtccaaccgctgacggtcgcactc
ctggcgggggaccgcgacggtatccggcaattccaggcctccatcgaagccatccagcat
caggtctcgcagctcaatccggaggcgacgcgtgacgaaattgaccggattcaccgggca
atcgaccgcacgcaccacgagctcgttagcattgaccgacgcgtggacgaaatcgccatg
cagcagttggccgagaccccagtcgaagcggcgagttatcgggcagaagagctggccgaa
ctcgtggtcaagggcgcgccgcaatacgcctggttcgatgacgaactttcgctggagccc
agacacgcgccgccactgtccactgaggaggctgcccggttgcgtgaagaccggcgccag
ctgggcgaggacttggcctacttggccgccgagctccccagcccggacgaactgccgcaa
ccagccgacatagcccagcttcatacacatctgtgcaagctgaagtcactggacgcggcg
acacagaccggtgaaattccgccgctgcgtgccatcacacccgaggtgctgcagtccgcg
cgcactctcctcgcccagctcggcgacgcccaggccgaactgaaagccatggctgaggca
gaggctgagtggcccggggtgcttcgtcgcaagtgcgctcaaccgtcatatgccaccgaa
gtcggcgcattggtggcacttttcgatgatgcgacgcgcctggtggaggcgcgctcggcc
ttcatgaagcggcccgtggaatttccgtcggaagcgctggcccatcccaagacagtcgag
gcggtcggacgcgcggcgtccactggcaagccgttcggtttcgtggcaattggtgccggg
gaggcgaaggagcatatcgccaaggtcaaggtgaatggtctcgtcccagcgtccactgac
gactggcagcatgttcagtcctacctgaagctgcacgaacaggttctttcattctccagc
cgctggaaccctgtggcggaggttctcgagctcccgagcctgatgggcggagtcgcgcat
ctgcgtatgctcgagctggtcactgccgcggccagaaaggcgcatagcatggcaaccaag
ttcgacgtgctattgcatcgagccgcagaggctgtctttgcgcgcgcgcctgccaacctt
gcttgcggtagcaatgaagactatgaggttgtgcgcggccacatcatgcagcacctgacg
cgtgcggagctggcggaggctgtcattgcgctcagtcaattgcaggagcggctggccggc
aagagcgggcctgtcacgcagaagctgcaggactacgtcgaccagtctctggggaatccg
gaaaaggacagtgcccgagtagcggccgactacaccgaactggttgtggaactgcgtcgg
gtgtgcggactcgcccaggtcatcggccgggtaaaggagtttgccgctcgcctgtatcag
gccggcggggcgaacattgccggacgggtgtcgtacgtgccggtggccaacggggtagag
gattcggccttcccagcgtcctggcgggaggcctggaactgggcccgcatgcgcacgcac
ctcgacaagattgaggcacgcaaggagttggtggagctgaacgcccgccgcacggacctt
gaagccgcgctggcccagatgtacaaggatgtcgtggggaaggccgcctggctggctacc
aaacgcaatgccagcccgaaggtgctgcaggcgctggccggctacgcgacggctattcgg
cgtatcggaaagggaaccgggccgaatgccgtaaggtaccggcgtgacgcccagcagtcg
atgctggatgccgcgggtgccgtgccgtgctggattatgagtcacgccaagatttcggag
tcgatgccggccgacatcggcgccttcgacctggtcatcgtcgacgaagcctcccagtcc
gacctgtgggcactgcccgctatcgtgcgcgccaaaaaagtcctggtggtcggcgacgac
aagcaggtttccccggatggcagtttcgtgtccagcgcagagattgacgaactgcgagct
cgattcctgagcgagcagccgtatggccaggacatgaccccggagaagtcgctctatgac
ctagctgcacgagtctttgccgctgaccaggtcatgctgcgcgagcatttccgctgcgtg
ccgcccatcattgcgtactccaaccagttctataagggcgccatccagccgttacgcatt
cctcttgcgtcccaacgcctcgacccgccgctcgtcgacatttacgtaccgggcggcatg
cgggacaggcacgactgcaaccgtctggaggcggaggccatctcagcggaaattaatgcc
atcctcgaggacgagcgctatgccggccgcaccatcggtgtggtctcgctcctgggcatg
gagcaagccaaattcattgacgcgatggtgcgggagcgttgttctgcgtccgaactgctg
cgacgcgagttcgactgcggggatgcacgcaccttccaaggcagcgagcgtgacatcatg
ttcctgtcgatggtggccgaccccgagcgttgccatccgctctcaggcaacgcctacgac
cagcgcttcaacgtggcgggcagccgcgcgcgcgaccgcatgtatctggttcgctccgtg
accgctgagcaagtctctgacaaggacattcgcatgaccttgctcgagcacttcagcaat
ccaaaggtcccgcaaggtgaggacgaccaggagggcctcatcaagctgtgtgagtctgga
ttcgagcgcgaggtattcacgctgcttgtgcagcgcggctaccgcgtcatccctcaggtg
aagagcggagcgtataggctggatatggtggtggaaggcgccaatgatgcgcgcctcgca
gtggaatgcgacggagacgcataccacgggccagaccgttggccgagcgacatgaaccgt
cagcgcattctggagcgtgctggctggacgttctggcggtgcttcgcctcgacctggtgc
ttgcgcaaagaggaggtcttcgaggaattggtcgagaggttgacggcgatgggtatcgag
cccattggcgcagtagcagcgctaccccgcctggtggagtctcggacatggactccgccg
gcggccagggcaacgccggacgcgattgatgacgttgttgacgccgccattgccgcagcc
aaggccagcacagtggagcagccacaatga
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