Cupriavidus necator NH9: BJN34_04805
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Entry
BJN34_04805 CDS
T05121
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cuh
Cupriavidus necator NH9
Pathway
cuh03030
DNA replication
cuh03430
Mismatch repair
cuh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJN34_04805
03430 Mismatch repair
BJN34_04805
03440 Homologous recombination
BJN34_04805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuh03032
]
BJN34_04805
03400 DNA repair and recombination proteins [BR:
cuh03400
]
BJN34_04805
Enzymes [BR:
cuh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJN34_04805
DNA replication proteins [BR:
cuh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJN34_04805
DNA repair and recombination proteins [BR:
cuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJN34_04805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
CoxE_N
Motif
Other DBs
NCBI-ProteinID:
AQV93215
UniProt:
A0A1U9UM10
LinkDB
All DBs
Position
1:1050728..1054240
Genome browser
AA seq
1170 aa
AA seq
DB search
MSAPRFVHLRLHSEYSIVDGIVRLDDAVKAAAADGMGALALTDLANAFGLIRYYKEARGK
GVKPVVGADVWLTNAEDRDKPARLLLLVQDRRGYLNLCMLLSRAWLGNQHRGRAEIDPAW
FLEPGEDDLPLATGLIALSGAMGGDIGMALANGNAEGARRAAQHWAAVFPQRFYIELQRA
GLAGTDAYVQQAVQLAAALQLPVVATHPVQFMTPDDYTAHEARVCIAEGELLANPRRTRR
FTTDQYFKTQDEMCALFADVPSALENAVEIARRCNLTLELGKPRLPLFPTPDGMSLDDYL
VYMAKDGLEKRLAVLFPDEAVREAKRPEYYGRLEFETGTIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQHGRD
RVITYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYGFVDGIAKLIPFKPGKLVT
IEEAKKEEPLLTERESNEEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGKLTDFCPLYT
QGAQNDGMSGVVSQYDKDDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWNCSH
IPLDDSPAFDILKTANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPS
FCARKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKK
KPEEMAQHRVMFREGADKNGLSAQQADDIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLK
AHHPAEFMAANMSLAMDDTDKVKILYEDCKVNKIAVLPPDVNASEYRFAPTDPKTIRYGL
GGIKGSGQGAIEDILRAREERPFADLFDFCERVDRRQVNRRTIEALIRAGAFDGLNDNRA
QLLASVPIAMEAAEQKAESANQVSLFDLMGDAGEAHRPELLDEPRWSPKRTLQEEKQALG
YYFSGHLFDAYRDEVRRFNKGTLAALEKEVQGNGGGFGRDVRGKTIAGVISGVRTQMTQR
GKMLIVTLDDGTGLVEMTVFNELFDANRQMFREDELLIATGNARHDTFTGGVRFTAESVM
DLVAARVRFASAVRLSMNGNSSTGMLRELLMPHLARASGVQGLPVRIRYEARAACCEAML
GQDWQVVPSDEALTALRQALSPDSVSTVYD
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccccgcttcgtacaccttcgcctgcattccgaatactccatcgtggacggc
atcgtccgcctcgatgatgccgtcaaggccgctgccgccgatggcatgggcgcgctcgcc
ctgacggacctcgccaacgccttcgggctgatccgttactacaaggaggcgcgcggcaag
ggcgtgaagccggtggttggcgccgacgtctggctcaccaacgccgaggaccgcgacaag
cccgcgcgcctgctgctgctggtgcaggaccgccgcggctacctgaacctgtgcatgctg
ctgtcgcgcgcgtggctgggcaaccagcaccgcggccgcgccgagatcgatccggcctgg
ttcctggagccgggcgaggacgacctgccgctggcgaccggcctgatcgcgctgtcgggc
gcgatgggcggcgacatcggcatggcgctggccaacggcaacgccgaaggcgcgcgccgc
gccgcgcagcactgggcggcggtattcccgcagcgcttctacatcgaactgcagcgcgcc
ggcctggccggcaccgatgcctacgtgcagcaggccgtgcagctggcggcggcattgcag
ttgccggtggttgccacgcatccggtgcagttcatgacgccggacgactacaccgcgcac
gaagcccgcgtgtgcatcgccgagggcgagctgctggccaatccgcgccgcacccggcgc
tttaccaccgaccagtacttcaagacccaggacgagatgtgcgcgctgttcgcggatgtc
ccctcggcgctggagaacgcggtcgagatcgcacgccgctgcaacctgacgctggaactg
ggcaagccgcgcctgccgctgttcccgacgccggacggcatgtcgctggacgactacctc
gtctacatggccaaggacggcctggaaaagcgcctggcggtgctgttccccgacgaggcg
gtgcgcgaggccaagcgcccggaatattacggacggctggagttcgagaccggcaccatc
atcaagatgggtttccccggctacttcctgatcgtggcggactttatcaactgggccaag
aacaacggcgtgccggtcggaccgggccggggctcgggtgccggttcgctggtggcctat
gcgctgggcattaccgacctggatccgctcaagtacgcgctgctgttcgagcgtttcctg
aacccggaacgggtttcgatgcccgacttcgatatcgacttctgccagcatgggcgcgat
cgcgtgatcacgtacgtgaaggagaagtacggcaaggacgcggtgtcgcagatcgccacc
ttcggcaccatggcggccaaggccgcggtgcgcgacgtgggccgcgtgctcgacctgggc
tacggctttgtcgacggcatcgccaagctgatcccgttcaagccgggcaagctggtcacc
atcgaagaggccaagaaggaagagccgctgctgaccgagcgcgagagcaacgaggaagaa
gtgcgccagctgctggagctggcgcagcgcgtggaaggcatgacgcgtaacgtcggcatg
cacgccggcggcgtgctgatcgcgccgggcaagctgaccgacttctgcccgctgtacacg
cagggcgcgcagaacgacggcatgagcggtgtggtcagccagtacgacaaggacgacgtc
gaggcagccggcctggtgaagttcgactttctgggcctgaccacgctgaccatcctggac
tgggccgagcgctatatccgccgcctggacccgagcaaggccgactggaactgcagccat
atcccgctcgacgacagccccgcgttcgatatcctgaagaccgccaacacggtcgccgtg
ttccagctggaaagccgcggcatgcagggcatgctcaaggacgccaagcctgaccgcttc
gaggacatcatcgcgctggtggcgctctaccgtcccggcccgatggacctgatccccagc
ttctgcgcgcgcaagcacggccgcgagaaagtggagtaccccgatccgcgcgtcgaaccc
gtcctgaaagagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcag
atcatcggcggctactcgcttggcggcgccgacctgctgcgccgcgccatgggcaagaag
aagcccgaggaaatggcgcagcaccgcgtcatgttccgcgaaggcgccgacaagaacggc
ctttccgcgcagcaggccgacgacatcttcgacctgatggagaagttcgcgggctacggc
ttcaacaagtcgcacgcggccgcctacgcgctgctggcgtactacaccgcctggctcaag
gcccatcacccggccgaattcatggcagccaacatgtcgctggccatggacgacaccgac
aaggtcaagatcctctacgaggactgcaaggtcaacaagatcgcggtgctgccgccggat
gtgaacgccagcgaataccgctttgcgccgaccgaccccaagaccattcgctatggcctg
ggcggcatcaagggcagcggccagggcgccatcgaagacatcctgcgcgcgcgcgaagag
cgcccgtttgccgacctgttcgatttctgcgagcgcgtcgaccgccgccaggtcaaccgc
cgcaccatcgaagccctgatccgcgccggcgccttcgacggcctgaacgacaatcgcgcc
caactgctggcatcggtgccgatcgccatggaggccgccgagcagaaggccgaatccgcc
aaccaggtgtcgctgttcgacctgatgggcgatgccggcgaggcgcaccgccccgaactg
ctcgacgagccgcgctggagccccaagcgcacgctgcaggaagagaagcaggcgctcggc
tattacttctccggccacctgttcgacgcctaccgcgacgaggtccgccgcttcaacaag
ggcacgctggccgcgctggaaaaggaagtgcagggcaacggcggcggtttcggccgcgac
gtgcgcggcaagaccattgccggcgtgatcagcggcgtccgcacgcagatgacccagcgc
ggcaaaatgctgatcgtgaccctggacgacggcaccgggctggtcgagatgaccgtgttc
aacgagctcttcgacgccaaccggcagatgttccgcgaggacgagctgctgattgccacg
ggcaacgcgcgccacgatacgttcacgggcggggtcaggtttacggccgagtcggtgatg
gacctggtggccgcccgcgtcaggtttgccagtgcggtgcgcctgtcgatgaacggcaat
tcgtcgaccgggatgctgcgcgagttgctgatgccgcacctggcccgggccagcggcgtg
caagggctgccggtgcggatccgctacgaggccagggccgcctgctgcgaggccatgcta
ggccaggactggcaggtggtgccatccgacgaagcgctgaccgcgctgcggcaggcactg
tcgccggacagcgtcagcacggtctacgactga
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