Cupriavidus necator NH9: BJN34_06080
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Entry
BJN34_06080 CDS
T05121
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cuh
Cupriavidus necator NH9
Pathway
cuh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJN34_06080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuh03400
]
BJN34_06080
DNA repair and recombination proteins [BR:
cuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJN34_06080
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJN34_06080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
Kinesin
FlaG
Motif
Other DBs
NCBI-ProteinID:
AQV93462
UniProt:
A0A1U9ULB3
LinkDB
All DBs
Position
1:1322917..1325001
Genome browser
AA seq
694 aa
AA seq
DB search
MTNLAEAAPALDEDKFVTFSGSPFQLYQPFPPAGDQPEAIRQLVEGVEDGLSFQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPTEYHQMILTL
RAGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV
ESLHFFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEAIKSELRERLEFFHKENRLV
EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGARPGDPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKTTLVDYGFRLPSALDNRPLKFDEFERKMRQVMFVSATPAQFEQ
ENAGQVVEQVVRPTGLVDPIIVVRPATTQVDDLLSEIHARVEAGERVLVTTLTKRMAEQL
TEFMSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTESMKKAIGETERRRAKQIAFNEAN
GITPRGVVKRIKDIIDGVYSVSDARAELQAAQEQARYEDMSEKQVSREIKRLEKLMLDHA
RNLEFEQAAQVRDQLAKLKAQVFGASGESALPPA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccttgccgaagccgcgccggccctggacgaagacaaattcgtcacattttcc
ggttccccgttccagctgtaccagccgttcccgcccgccggcgaccagccggaggcgatc
cggcaactggtggagggcgtggaagacggcttgtcgttccagacactgctgggggtcacg
ggctcgggcaagaccttcaccatggccaatgtgatcgcccggatggggcggccggccatc
gtgtttgctccgaacaagacgctggcggcgcagctctacgcggaattccgtgaattcttc
ccgcgcaacgccgtcgagtacttcgtcagctactacgactactaccagcccgaggcctac
gtcccgcaacgcgacctgtttatcgaaaaggactcgtcgatcaacgagcatatcgagcag
atgcggctgtcggcgaccaaaagcctgctggagcgccgcgacaccatcatcgtggcgacc
gtctcagcgatctatggtatcggcaacccgaccgaataccaccagatgattctcaccttg
cgcgccggcgacaagatcagccagcgcgatgtgatcgcacgcctgatcgcgatgcagtac
acccgcaacgagaccgacttccagcgcggcaccttccgcgtgcgcggcgacaccatcgac
atcttcccggccgaacacgccgagatggcggtgcggctggagatgttcgacgacgaagtc
gaatcgctgcatttcttcgacccgctgacgggccgcgtgcgccagaagatcccgcgcttc
acggtctatccgtcgagccactacgtgaccccgcgcgagaccgtgctgcgcgcgatcgag
gcgatcaagtcggagctgcgcgagcggctggagttcttccacaaggaaaaccggctggtg
gaggcgcagcggctggagcagcgcacccgcttcgacctggagatgctgtccgagctgggc
ttctgcaaaggcatcgagaactactcgcggcacctgtccggtgcacgccccggcgatccg
ccgccgacgctggtcgattacctgccgccggacgcgctgatgttcctggacgagtcgcac
gtgctgatcggccagctcaacggcatgtacaacggtgaccgtgcgcgcaagaccacgctg
gtggattacggcttccggctgccgtcggcactggacaaccggccgctgaagttcgacgag
ttcgagcgcaagatgcgccaggtgatgtttgtctcggccacgcccgcgcagttcgagcag
gagaatgccgggcaggtggtggagcaggtggtgcgtccgaccgggctggtcgatcccatc
atcgtggtgcgcccggcgaccacgcaggtagacgacctgctgtccgagatccacgcccgc
gtcgaggccggcgagcgcgtgctggtgaccacgctgaccaagcgcatggccgagcagctc
accgagttcatgtccgagaacggcgtcaaggtgcgctacctgcactcggatatcgacacc
gtcgagcgggtggagatcatccgcgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgcgagggcctggatattccggaggtgtcgctggtggcgatcctcgat
gcggacaaggaaggcttcctgcgcgccgagcgctcgctgatccagaccatcggccgcgcc
gcgcgcaatgtcaacggcaccgccatcctgtacgcggaccgcatgacggaatcgatgaag
aaggccatcggcgagaccgagcgccgccgcgccaagcagatcgcgttcaacgaggccaac
ggcatcacaccgcgcggcgtggtcaagcgcatcaaggacatcatcgacggcgtctacagc
gtgagcgatgccagggctgagctgcaggccgcgcaggagcaggcccgctacgaggatatg
agcgagaagcaggtctccagggagatcaagcggctggagaagctcatgctcgaccatgcc
cgcaacctggagttcgaacaggcggcgcaggtacgcgaccagctggccaagctcaaggcg
caggtgttcggcgccagcggcgagagcgcgctgccgccggcctga
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