Cupriavidus necator NH9: BJN34_10340
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Entry
BJN34_10340 CDS
T05121
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
cuh
Cupriavidus necator NH9
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuh03009
]
BJN34_10340
Ribosome biogenesis [BR:
cuh03009
]
Prokaryotic type
ribosomal protein modification factors
BJN34_10340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AQV94286
UniProt:
A0A1U9UNB9
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All DBs
Position
1:complement(2272339..2274528)
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AA seq
729 aa
AA seq
DB search
MEIKVNFLDKLRLEARFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCV
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPPDISDKDRQGILRSIERCTVKKVVQA
GPEFVIEEVENLDVDAQSLLTLKPASDASTYIAGKDLPLEQTIANMSGVLADLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEFIERLNCNHFYGGTFWGED
IANAAFVHYPNERWFKPGPEDALPAEILDAYCLQIYNPDGELYGSHLYDTNSGNVQRGVC
SLPYVRQSDGEVVYFPSNLIENLFVSNGMSAGNTLAEAQVQCLSEIFERAIKREILEGEI
ALPDVPHEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGTYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFVSNAVTESNNFVEHFIDSSGVVSWRF
FSAKANFEFVEWDFSGQGENSNAEEAATLFGILEDMGKEVYMAVYDQLGAVACRILVPGY
SEVYPVEDLIWDNTNKALLFRADILNLHRLDDAGLAALLERLDDSELDEYSDIATLIGIE
FDENTDWGKLTVLELKLLIHLALQQFEAAQELVGAFLQYNDNTVERGLFYQALNVVLEVL
LDDDLELDDYAVNFRRMFGNTRMDAVMGSVDGSVRFFGLTPTSMKLEGFDRHHRLIDSYK
KLHKARANV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagtcaactttctcgataagctacgtcttgaagccaggttcgatgacttc
acggtagtggccgaccagcctatccgttataagggcgatggctcggcgcctggtcccttc
gattattttctggcctcatcggccttgtgtgcggcttactttgtgaagttgtactgcgta
acccgcaatattcctaccgagaatatccgtctgtcgcagaataatattgtcgatccggaa
aaccgctaccagcagattttcaagattcaggttgagttgccgccggatatctcggataaa
gaccgccaaggtattttgcgctctatcgagcgttgtaccgtgaaaaaagtggtgcaagcc
ggacccgagtttgtaattgaagaggtagagaacttagatgtcgatgctcagtcgttgctg
acgttgaagccggcttctgacgccagcacctatattgcgggcaaggatctgccgttggag
caaaccatcgccaatatgtcgggggttttggcggacttgggcatgaagattgaaatcgct
tcgtggcgtaatatcgttcccaatgtgtggtcgctgcatatccgcgatgcgcactcgccg
atgtgttttaccaatggcaagggcgcgaccaaagaaagcgcgttggcgtcggcgttggga
gagtttatcgagcgcctgaattgcaaccatttctatggcggtacgttttggggcgaagac
atcgccaatgcggcgtttgttcattacccgaacgagcgctggttcaagcctggccctgag
gatgcgctgccggcggaaattctggatgcgtactgcctccaaatttataatcccgatggc
gagttgtatggctcgcatctgtacgacactaactccggcaatgtacagcgcggtgtctgt
tcgctgccgtatgtgcggcagtcggacggcgaagtggtgtattttccgtccaacctgatc
gaaaacctattcgtcagcaatggcatgagtgccggtaatacgctggctgaagcgcaggtc
caatgcctgtccgaaattttcgagcgggcgataaagcgcgaaattctggaaggtgaaatc
gcattgcctgatgtgccgcacgaagtgctggcgaaataccctggcattctggccggaatt
caggggttggaagagcagggctttccggtgctggtaaaggacgcatcgctgggtgggacc
tatccggtgatgtgcgtcaccttgatgaacccgcggacaggcggtgtctttgcctcgttc
ggcgcgcacccaagcttcgaggtggcgctggaacggagtctgacggaattgctgcagggg
cgcagttttgaaggcctgaacgatttacctcagcccacctttgtcagtaacgccgtgact
gaatcaaataactttgttgagcacttcattgattccagcggcgtggtgtcgtggcgcttt
ttcagcgccaaagcgaatttcgagtttgttgagtgggatttttctggtcagggtgaaaac
tccaatgccgaggaagccgcaacgttgttcggcattctcgaagacatgggcaaagaggta
tacatggcggtgtatgaccagctgggcgccgtagcctgccggattttagtgcccggttat
tcggaagtttacccggtagaggatttgatctgggataacacaaacaaggcgctgttgttc
cgcgccgatattttgaacttgcatcgcctggacgatgccggcctggcagctctgcttgag
cggttggatgacagtgagctggatgagtactccgatattgccactttgatcggcatcgaa
tttgacgagaatacggactgggggaagctaacagttctcgagttgaagctgctgattcat
ctcgccttgcagcaatttgaggcggcgcaagagctggtgggagccttcctgcagtacaac
gacaacacggtcgagcgcggattgttttaccaggccttgaatgtggtgctggaggtgctg
ctcgatgacgacctggaactagacgactacgcggtcaacttccgtcggatgtttggcaac
actcggatggacgcggtaatggggtcagtggacggcagcgtgcgcttcttcgggttaacg
ccaacgagtatgaagctggagggtttcgataggcaccaccgcctgatcgacagttacaaa
aaattgcataaggcgcgggccaatgtttga
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