Cupriavidus necator NH9: BJN34_13205
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Entry
BJN34_13205 CDS
T05121
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cuh
Cupriavidus necator NH9
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cuh01011
]
BJN34_13205
Enzymes [BR:
cuh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BJN34_13205
Peptidoglycan biosynthesis and degradation proteins [BR:
cuh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BJN34_13205
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
HTH_Tnp_ISL3
LysM3_LYK4_5
HTH_23
DUF6491
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AQV94839
UniProt:
A0A1U9UQK5
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All DBs
Position
1:complement(2879982..2881658)
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AA seq
558 aa
AA seq
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MKIGRLLAVVACAALLAACASTPTPPDGANGAATAQTAKRQDPLNSLSDKSALSSSTGIK
ADQGGLDWLRGPSNDIWDRIRRGFAMQDLEGTLVDDRTQWYAQRPEYMERMVGRSSRYLY
HIVEELERRKMPTELALLPFVESAFNPQAQSTAKAAGMWQFIPSTGKSYNLKQNMFRDER
RDVLASTDAALDYLARLYDMFGDWQLALAAYNWGEGAVSRAIARNQARGLPTDYASLPMP
NETRYYVPKLQAVKNIIANPAAYGVRLPEIPDHPYFVTVTTSRDIDVNLAAKLADMSVEE
FKALNPSFNRPVILGASNPQILLPFDNAERFQYNLNTYRGGLSSWSAVTVDSRERVESLA
ARLNVDADTLREINSIPRGMRLKAGSTVMIPRSGHHDQDISATLADSAMLAMEPDVPDAR
RVVVRASRRDTVATVARRYGVSAGQVQSWNKLSGTKLVAGQSLVLMVPVRGAGAVRAARA
EQADRAERAELAERPEHGSKGGKGGIVRVSAKGKAEPRKRVVVEAHTTKSAPARVTREAK
AGPTVKASGKASTKAKAR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattggtcgattactggcggtggtcgcgtgcgccgcgctgcttgcagcgtgtgcc
agcacccccacgccgcctgatggcgccaatggcgccgcgaccgcccagactgccaagcgc
caggatccgctcaactcgctcagcgacaagtcggcgctttcttcctctaccgggatcaag
gccgaccagggtggcctggactggctgcgcggcccgtccaacgacatctgggaccgcatc
cggcgcggctttgccatgcaggacctggagggcacgctggtcgacgaccgcacccagtgg
tacgcgcagcggccggaatacatggaacggatggtcgggcgctcaagccgctacctgtat
cacatcgtcgaagaactggagcggcgcaagatgccgaccgagctggcactgctgccgttc
gtcgagagcgcattcaacccgcaggcgcagtccaccgccaaggcggccgggatgtggcag
ttcatcccgagcacgggcaagtcgtacaacctgaagcagaacatgttccgcgacgagcgc
cgcgacgtgctggcctcgaccgacgccgcgctggactacctggcgcggctttacgacatg
ttcggcgactggcagctggcgctggcggcgtacaactggggcgagggcgcggtgtcgcgc
gcgatcgcgcgcaaccaggcacgcgggctgccgaccgactacgccagcctgcccatgccc
aacgagacgcgctactacgtgccgaaactgcaggcggtcaagaacatcatcgccaacccg
gcggcgtacggcgtcaggctgcctgagatcccggaccacccgtactttgtcacggtgact
acgtcgcgcgatatcgacgtgaacctggcggccaagctggcggacatgtcggtggaggag
ttcaaggcgctcaacccgtcgttcaaccggccggtgatcctgggcgcgtcgaacccgcag
atcctgctgccgttcgataacgccgagcgcttccagtacaacctgaacacctaccgtggc
gggttgtcgagctggtccgcggtgacggtggacagccgcgagcgggttgaatcactggcg
gcgcggctgaacgtcgatgccgatacgctgcgcgagatcaacagcatcccgaggggcatg
cgcctgaaggccggctcgaccgtgatgatcccgcgttcgggccaccacgaccaggacatc
agcgcgaccctggccgacagcgccatgctggcgatggagcccgacgtgccggatgcgcgc
cgcgtggtggtgcgcgccagccggcgcgacaccgtggccacggtggcgcgccgctacggc
gtctcggcggggcaggtgcagtcgtggaacaagctctccggcaccaagctggtcgccggg
cagagtctggtgctgatggtgccggtgcgcggcgccggcgcggtgcgcgcggcacgggcc
gagcaagctgaccgggccgagcgcgcggaacttgccgaacgccccgagcatggcagcaag
ggcggcaagggcggcatcgtccgggtttccgcaaagggcaaggcggagccgcgcaagcgc
gttgtcgtggaggctcacaccaccaagtcggcgccggcgcgcgtgacgcgcgaggccaag
gccggcccgaccgtcaaggcgtcgggcaaggccagcaccaaggccaaggcccgctga
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