Cupriavidus necator NH9: BJN34_13225
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Entry
BJN34_13225 CDS
T05121
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cuh
Cupriavidus necator NH9
Pathway
cuh03030
DNA replication
cuh03430
Mismatch repair
cuh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJN34_13225
03430 Mismatch repair
BJN34_13225
03440 Homologous recombination
BJN34_13225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuh03032
]
BJN34_13225
03400 DNA repair and recombination proteins [BR:
cuh03400
]
BJN34_13225
Enzymes [BR:
cuh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJN34_13225
DNA replication proteins [BR:
cuh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJN34_13225
DNA repair and recombination proteins [BR:
cuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJN34_13225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AQV94843
UniProt:
A0A1U9UQB8
LinkDB
All DBs
Position
1:2883989..2884720
Genome browser
AA seq
243 aa
AA seq
DB search
MRQIVLDTETTGLNAATGDRLIEIGCVELMNRRLTGRHLHFYVNPERDIDEGAIAVHGIT
VEFLADKPRFAEVADDIREFVQNAELIIHNAPFDLGFLDMEFQRLGLPPFRQHAGNVIDT
LREARQMFPGKRNSLDALCDRLGISNAHRTLHGALLDAELLAEVYLAMTRGQDSLVIDMH
DSSASHGGAVAAADLSRLALPVLRATQEEQLAHLDLLKGLDKASGGKTVWQEAPAAEPGS
LAA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaaatcgttctcgataccgaaaccaccggcctgaatgccgccaccggcgaccgc
ctgattgaaatcggctgcgtcgagttgatgaaccgccgcctgacggggcgccacctgcac
ttctacgtcaatccggaacgcgatatcgacgagggcgcgatcgccgtccacggcatcacg
gtcgaattcctggccgacaagccccgctttgccgaagtcgccgacgacatccgcgagttc
gtccagaacgccgaactgatcatccacaacgcgccgttcgacctgggcttcctcgacatg
gagttccagcggctgggcctgccgccgttccgccagcatgcaggaaatgtgatcgatacc
ctgcgcgaagcccgccagatgttccccggcaagcgcaactcgctcgacgccctgtgcgac
cggctgggcatcagcaacgcccaccgcacgctgcacggcgcactgctcgatgccgaactg
ctggccgaggtctacctggccatgacgcgcggccaggattcgctggtgatcgacatgcac
gacagcagcgcaagccacggcggcgcggttgccgcggccgacctgtcgcgcctcgccctg
cccgtactgcgcgccacgcaagaggaacagctggcccacctcgacctgctcaaggggctg
gacaaggccagcggcggcaagaccgtgtggcaggaagcccccgcggcggagcccggaagc
ctggccgcctga
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