Cupriavidus necator NH9: BJN34_14810
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Entry
BJN34_14810 CDS
T05121
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuh
Cupriavidus necator NH9
Pathway
cuh03420
Nucleotide excision repair
cuh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJN34_14810
03430 Mismatch repair
BJN34_14810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuh03400
]
BJN34_14810
Enzymes [BR:
cuh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJN34_14810
DNA repair and recombination proteins [BR:
cuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJN34_14810
MMR (mismatch excision repair)
Other MMR factors
BJN34_14810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AbiJ_NTD5
Motif
Other DBs
NCBI-ProteinID:
AQV95147
UniProt:
A0A1U9URU6
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All DBs
Position
1:complement(3212791..3215139)
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AA seq
782 aa
AA seq
DB search
MSDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGRVSPAGILAVTF
TNKAAKEMQMRLSSMLPINTRGMWIGTFHGLCNRMLRAHFRDAGLPQTFAILDSQDQLSA
LKRLLKSLNVDDEKYPAKNLQYFINNAKEQGLRPADVEANDDFNKRFVDLYAAYDQQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHVLVDEFQDTNVLQYQWLKLLAGYGTQN
PAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRRMIKLEQNYRSHGHILDSANHLISH
NARRLGKNLRTDAGHGEPVRVFQGGSDGQEAAWIIEEIRDQIAQGASRAEIAILYRSNAQ
SRVIEHALFSAGIAYRVYGGLRFFERAEIKHALAYMQLLENPRNDAAFGRVVNFPARGIG
ARSLEVLQDMARQYDCALAEAVAYVPGAAGSKLAAFARLIDKMREDTRRMTLAETVEYVI
NHSSLITHYQGEKEGQDRIENLQELVTAAQAFVVEEGYGLEALAAVIPADRTPAAPALAD
GDQAQQVLDPEALPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFDVVF
ITGMEEGLFPHENSMMDPDGLEEERRLMYVAITRARKRLYMSFAQSRMLHGQTRYHVRSR
FFEELPEASLKWLTPPAQSYGGVRRQERDNAWGRDWFRKPEDVPYTGTRPTGGMDNGNGY
ADARREAGTGLRVGQSVFHNKFGEGVITALEGEGTDARANIKFKRHGAKWLALSVAKLDA
ID
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgcttgccaacctgaacgccgaacaactagccgccgtcaccctgcccgac
gaaccggcgctgatcctggcgggcgcgggcagcggcaagacccgcgtgctgaccacgcgc
atcgcctggctgatccagaacggccgggtctcgccggcgggcatcctggcggtgaccttt
accaacaaggccgccaaggaaatgcagatgcggctgtcgtcgatgctgccgatcaacacc
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatttc
cgcgacgccggcctgccccagacctttgccatcctggacagccaggaccagctttcggcg
ctcaagcggctgctcaagtcgctcaacgtcgacgatgagaagtacccggccaagaacctg
cagtacttcatcaacaacgccaaggagcagggcctgcgcccggccgacgtcgaggccaac
gacgacttcaacaagcgcttcgtcgacctctacgccgcctacgaccagcagtgccagcgc
gagggcgtggtcgacttcgccgagctgctgctgcgctgctacgagctgctgcgctacaac
gacgccatccgccagcactaccagcaccgcttccgccatgtgctggtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctcaagctgctggccggctatggcacgcagaac
ccggccgcggtctttgccgtgggcgacgacgaccagagcatctacgccttccgcggtgcc
aacgtcggcaatatgcgcgacttcgagcatgagttccgcgtgcgccggatgatcaagctg
gagcaaaactaccgctcgcacgggcatatcctggattcggccaaccacctgatctcgcac
aacgcgcgccgcctgggcaagaacctgcgcaccgacgccggccacggcgagccggtgcgg
gtgttccagggcggctcggacggccaggaggccgcctggatcatcgaggagatccgcgac
cagatcgcgcagggcgccagccgtgccgagattgccatcctgtaccgcagcaacgcgcag
tcgcgcgtgatcgagcatgcgctgttctcggccggcatcgcgtatcgcgtgtacggcggc
ctgcgcttcttcgagcgcgccgaaatcaagcacgcgctggcctacatgcaactgctggag
aatccgcgcaacgacgccgccttcggccgcgtggtcaacttcccggcgcgcggcatcggc
gcgcgctcgctcgaagtgctgcaggacatggcgcgccagtacgactgcgcgctggccgag
gccgtggcctacgtgcccggcgcggccggcagcaagctggcggcgtttgcgcgcctgatc
gacaagatgcgcgaggacacgcgccgcatgacgctggccgagaccgtcgagtacgtgatc
aaccacagcagcctgatcacccactaccagggcgagaaggaaggccaggaccgcatcgag
aacttgcaggaactggtgaccgccgcgcaggccttcgtggtcgaggaaggctacggcctg
gaagcgctggcggcggtgatcccggccgaccgcacccccgccgcgccggcgctggccgac
ggcgaccaggcgcagcaggtgctggaccccgaagcgctgccggtggtgatgacgccgctg
gtcgcgttcctgacccacgcctcgctggaagccggcgacaaccaggcccaggccggccag
gacgcggtgcagatgatgaccgtgcacgcggccaaggggctggagttcgacgtggtcttc
atcaccggcatggaagaggggctgttcccgcacgaaaacagcatgatggacccggacggc
ctggaggaagagcgccggctgatgtacgtggcgatcacccgcgcgcgcaagcggctctac
atgtcgttcgcgcaaagccgcatgctgcacggccagacccgctaccacgtgcgctcgcgc
tttttcgaggaactgcccgaggcctcgctcaagtggctgaccccgccggcgcagagctac
ggcggcgtgcgccgccaggaacgcgacaacgcctggggccgcgactggttccgcaagccc
gaggacgtgccctataccggcacgcgccccaccggcggcatggacaacggcaatggctac
gccgatgccaggcgcgaggccggcaccggcttgcgcgtgggccagtcggtgttccacaac
aagttcggcgaaggcgtgatcaccgcgctggaaggcgagggcacggacgcgcgcgccaat
atcaagttcaagcgccacggcgccaagtggctggcgctgtcggtggcgaagctggacgcg
atcgactga
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