Cupriavidus necator NH9: BJN34_15615
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Entry
BJN34_15615 CDS
T05121
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cuh
Cupriavidus necator NH9
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuh03400
]
BJN34_15615
Enzymes [BR:
cuh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BJN34_15615
DNA repair and recombination proteins [BR:
cuh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BJN34_15615
Prokaryotic type
BJN34_15615
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AQV95306
UniProt:
A0A1U9URC9
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All DBs
Position
1:3378634..3380196
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AA seq
520 aa
AA seq
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MQAAGNPATARPPYRIGKDFARGLVWFRRDLRATDHAALHYALRHCARVWCVFVFDRDIL
DPLLARGLQADRRVDFIRQSLLELAETLAAAGGGLIVLHDRAETALPALARELEAEAVFA
NHDYEPAAKARDETVRQALAGQPCAFFSFKDQVVFERDEILTGQGKPFSVFTPYKNAWLR
TVQPFDLRPYPVDPYLQALAPVPAAHRNPMPTLDQLGFRTSNLAEIAMPTGTSGARALFE
EFTVRMGEYDRRRDYPALRGPSYLSVHLRFGTVSIRTLARAAHEAVLRGGADGTGGTGAA
VWLSELIWRDFYFMILHHHSRVAAGAAFHPAYDAIRWQDGDTAERYFRAWCDAATGYPLV
DAAMLQIRQSGYMHNRLRMVTASFLVKDLGVDWRRGEQYFADQLNDFDLAANNGGWQWAA
STGCDAQPWFRIFNPVTQSERFDPQGRFIRKYLPQLAALPDKYLHAPWTAPGPVLADAGV
RLGDNYPRPLVQHDLARKQTLMRYEVVKRAGNEEAAGVED
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagcaggcaacccggccacggcccggccaccctaccggatcggcaaggacttt
gcgcgtgggctggtctggttccggcgcgacctgcgcgccactgaccacgcggcgctgcat
tatgccctcaggcactgtgcccgggtgtggtgtgtgttcgtgttcgaccgcgacatcctg
gatccgctgctggcgcgcggcctgcaagccgaccggcgggtagattttatccggcagtcg
ctgctggaactggccgagaccctcgccgcggccggcggcggcctgatcgtgctgcacgac
cgggccgaaaccgccctcccggcgctggcgcgcgagctggaggccgaggcggtcttcgcc
aaccacgactacgaacccgccgccaaggcccgcgacgaaaccgtgcgccaggcactggcg
gggcagccatgcgccttcttcagcttcaaggaccaggtggtcttcgagcgcgacgagatc
ctgaccggccagggcaagcccttctcggtcttcacgccgtacaagaatgcctggctcagg
accgtacagccgttcgacctgcgcccttacccggtcgatccatacctgcaggcactggcg
ccggtgccggccgcgcaccgcaaccccatgccgacgctcgatcaactcggctttcgcacc
agcaacctcgccgagatcgccatgcccaccggcacgtctggcgcgcgggcgctgttcgaa
gagttcaccgtgcgcatgggggagtatgaccgccggcgcgactacccggccctgcgcggc
cccagctacctgtcggtacacctgcgcttcggcaccgtctcgatccgcacgctggcgcgc
gccgcgcacgaggccgtgctgcgcggcggcgccgacggcacgggcggcacgggcgccgcg
gtgtggctgtcggagctgatctggcgcgatttctacttcatgatcctccatcaccattcg
cgcgtggcggccggcgcggccttccaccccgcctatgacgcgatccgctggcaggacggc
gacaccgccgagcgctacttccgcgcctggtgcgacgccgccaccggctacccgctggtc
gatgccgcgatgctgcagatccggcaaagcggctatatgcacaaccgcctgcgcatggtg
acggcgagctttctggtcaaggacctcggcgtggactggcgccgcggcgagcagtatttt
gccgaccagctcaacgatttcgacctcgccgccaataacggcggctggcagtgggccgcg
tccaccggctgcgatgcgcagccgtggttccgcatcttcaatccggtgacgcaatcggaa
aggttcgatccgcagggccgttttatccgcaagtacctgccgcagctggcggcactgccc
gacaagtacctgcatgcgccatggaccgcgcccgggcccgtgctggcggatgccggcgtg
cgcctgggcgacaactacccgcgcccgctggtgcagcatgacttggcgcgcaagcaaacg
ctgatgcggtatgaggtggtgaagcgcgccggcaacgaggaggctgccggcgtggaggac
tga
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