Cupriavidus necator NH9: BJN34_18520
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Entry
BJN34_18520 CDS
T05121
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cuh
Cupriavidus necator NH9
Pathway
cuh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BJN34_18520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuh03021
]
BJN34_18520
03400 DNA repair and recombination proteins [BR:
cuh03400
]
BJN34_18520
Enzymes [BR:
cuh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BJN34_18520
Transcription machinery [BR:
cuh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BJN34_18520
DNA repair and recombination proteins [BR:
cuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BJN34_18520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AQV95877
UniProt:
Q5KST6
LinkDB
All DBs
Position
1:complement(4010183..4011163)
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AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKDGEGVVTAADIELPHDVEI
INPNHVIAHLSAGGKLDMQIKVEQGRGYVPGNVRKFGDESGKVIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETDGVISPEEAIRQSARILVDQLSVFAALEGTESAAEAA
SSRTPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctcaagccaaaaatcatcgccgtcgagcctctgggcgaccatcac
gccaaagtcgtgatggagccgttcgagcgcggctacggccatacgctcggtaacgccctg
cgtcgcgtgctgctgtcgtcgatggtcggttatgcaccgaccgaagtcacgatcgctggg
gtggtccacgagtattccaccatcgacggcgtgcaggaagacgtcgtcaacctgctgctc
aacctgaagggcgtcgtgttcaagctgcacaaccgcgacgaagtcacggtgtcgctgcgc
aaggatggcgaaggcgtggtcacggctgccgatatcgagctgccgcacgacgtcgagatc
atcaacccgaaccacgtgatcgcccacctgtctgccggcggcaagctggacatgcagatc
aaggtcgagcaaggccgcggctatgtgccgggcaacgtgcgcaagttcggcgacgagtcg
ggcaaggtcatcggccgcatcgtgctggacgcttcgttctcgccggtgcgccgcgtgtcg
tacgcggttgagtccgctcgcgtggaacagcgtaccgacctggacaagctggtaatgaac
atcgaaaccgacggcgtgatctcgcccgaggaagcgattcgccagtcggcccgcatcctg
gtcgaccagctgtccgtgttcgccgcgctggaaggcaccgagtccgcagcggaagccgca
tcgagccgcacgccgcagatcgacccgatcctgctgcgcccggtcgacgacctggagctg
acggtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctgatc
cagcgtaccgagaacgaactgctcaagaccccgaacctgggtcgcaagtcgctcaacgag
atcaaggaagtccttgcctcgcgtggtctgaccctcggcatgaagctcgagaactggccg
cccgcaggtctggagaagtaa
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