KEGG   Cupriavidus necator NH9: BJN34_21305
Entry
BJN34_21305       CDS       T05121                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
cuh  Cupriavidus necator NH9
Pathway
cuh02024  Quorum sensing
cuh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cuh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BJN34_21305
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BJN34_21305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cuh03019]
    BJN34_21305
   03036 Chromosome and associated proteins [BR:cuh03036]
    BJN34_21305
Messenger RNA biogenesis [BR:cuh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BJN34_21305
Chromosome and associated proteins [BR:cuh03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BJN34_21305
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AQV96409
UniProt: A0A1U9UV15
LinkDB
Position
2:287871..288185
AA seq 104 aa
MQPKQSLQQNDFLNSVRKERKRVDVYLVNGVRLTGSIASFDQFVVMLSSPGGGMQTIYKS
AISTIQVQTAARQAGSSTANDRESTTPSIVERKRRPITTGSGGE
NT seq 315 nt   +upstreamnt  +downstreamnt
atgcagcctaagcaatcccttcagcaaaacgactttctgaactcagtgcgcaaggagcgg
aagcgggtcgacgtgtacctcgtcaatggcgtcaggctcactggttcaatcgcgtcgttc
gaccagttcgtggtgatgctgagttcgcccggcggcggcatgcagacgatttacaagagc
gccatatcgaccattcaagtgcagacagcggcgcgtcaagctggttccagcacggccaat
gacagggagtccacgacgccttctattgtcgagcggaaacgtcggccgataacaactggt
agcggaggcgaatag

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