Cupriavidus necator NH9: BJN34_35045
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Entry
BJN34_35045 CDS
T05121
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cuh
Cupriavidus necator NH9
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuh03016
]
BJN34_35045
Enzymes [BR:
cuh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BJN34_35045
Transfer RNA biogenesis [BR:
cuh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BJN34_35045
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AQV99097
UniProt:
A0A1U9V373
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All DBs
Position
2:complement(3359347..3359916)
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AA seq
189 aa
AA seq
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MARLFIAVEVPPAQAAWLLSTLPAAHGVRAAAPAQVHLTLHFLGECHTPGEQLEAALGNI
SAAAFELRAFGTGRFRSGQGSVLWAGLAPGPGLEALRALHAAVGQALADTAGITPERRRF
HPHLTLARCKPSVPESVLRAWLDTHRTLASEPWRVARLVLFESRLGPQGPQHLVRQVWPL
TQAGPTPGC
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcctgtttatcgccgtggaagtgccgcccgcacaggcggcatggctgctgtcg
acccttcccgccgcgcacggcgtgcgggccgccgcgcccgcgcaggtccacctgaccttg
cacttcctgggtgagtgccacacgcctggtgaacaacttgaagccgcgctcggcaacatc
agcgcggctgccttcgaactccgtgcattcggtaccgggcgctttcgcagcggccagggt
tcggtgctgtgggcaggcctggcgccaggccccggcctggaggcgctgcgcgccttgcat
gccgctgtcggccaggcgctggcggacaccgccggcatcacgccggagcggcggcgcttt
catccccacctgacgctggcgcgctgcaagccgtcggtgccggaaagcgtgctgcgcgcc
tggctcgatacacaccgtacgctggccagcgagccgtggcgcgtcgcgcggctggtgctg
ttcgaaagccggctcggcccgcaaggcccgcagcatctggtgcgccaggtgtggccgttg
acgcaggccggccctacgccaggttgctga
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