Cronobacter universalis: AFK65_01320
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Entry
AFK65_01320 CDS
T04063
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cui
Cronobacter universalis
Pathway
cui03420
Nucleotide excision repair
cui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFK65_01320 (uvrD)
03430 Mismatch repair
AFK65_01320 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cui03400
]
AFK65_01320 (uvrD)
Enzymes [BR:
cui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFK65_01320 (uvrD)
DNA repair and recombination proteins [BR:
cui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFK65_01320 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AFK65_01320 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALB53378
UniProt:
A0AAC8ZQF9
LinkDB
All DBs
Position
287409..289571
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLMMVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDDGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNGIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTNNILNAANALIANN
AGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKVWQENGGALQDCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQACRQLLQEKALAGRAASALQRFLELIEALAHETIDMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADAWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIAELPEGCVEEVRLRASVSRPVSHKQLG
APIAQNDSGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFNGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaacgataaacagcgcgaagccgtagccgcg
ccgcgcagcaatatgctggtgctggcgggcgcgggcagcggaaagacgcgcgtgctggtg
catcgtatcgcctggctgatgatggtagaaaactgttcgccgtactccatcatggcggtg
acctttaccaacaaagcggcggcggagatgcgccaccgtatcggccagctgatgggcacc
agccagggcggcatgtgggtcggcacgttccacggtctcgcgcatcgcctgctgcgcgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgatagcgaagatcagctg
cgtctgctcaagcgtcttatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcgatgtggtacatcaacggcaaaaaagatgacggcctgcgcccgcaccatattcag
agctacggcaacccggtagagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgcgaccgcgcggggctggtggatttcgccgagctgctgctgcgcgcccacgagctgtgg
ctcaacaaaccgcatatcctcaaccactaccgcgagcgcttcaccaatattctggtggat
gagttccaggacaccaacggcattcagtacgcctggatccgcctgctggcgggcgatacc
ggcaaagtgatgatcgtgggcgacgatgaccagtcgatctacggctggcgcggcgcgcag
gtggaaaatatccagcgcttcctgaacgattttccgggcgcgcagactattcgtctggag
cagaactaccgctccactaacaacattcttaacgccgcgaacgccctgatcgccaacaac
gcggggcgtcttggcaaagagctgtggaccgacggcagcgacggcgagcctatctcgctg
tattgcgcgttcaacgaactggatgaagcgcgctttgtggtcaaccgcatcaaggtctgg
caggagaacggcggcgcgttgcaggattgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgttacaggccagcatgccgtatcgtatctacggcggcatg
cgattcttcgaacgccaggagatcaaagacgcgctctcttacctgcgtcttatcgccaac
cgtaacgacgacgcggcctttgagcgcgtggtgaatacgccgacgcgcggcatcggcgac
cgcacgctggatgtcgtgcgccagaccgcgcgagaccgccagctgacgctctggcaggcg
tgccgccagctgttgcaggaaaaagccctggccggccgcgccgccagcgctttgcagcgt
ttccttgaacttatcgaggcgctggcgcatgaaaccatcgatatgccgctgcatgtgcag
accgaccgggtgattaaggattccggcctgtggctgatgtatgagcaggaaaaaggcgag
aagggccaggcgcgtatcgaaaacttagaggaactggtgacggcgacgcgccagttcagc
tacaacgaagaagacgaagatctgatgccgttgcaggcgtttttatcccacgcggcgctg
gaagcgggagaagggcaggccgacgcctggcaggacgcggtgcagctgatgacgctgcac
tccgccaaagggctggagttcccgcaggtgtttatcgtcggtatggaagaggggatgttc
ccaagccagatgtcgctcgatgaaggcggccgtctggaagaggagcgacgcctggcctat
gtgggcgtcacccgcgccatgcagaagctgacgctcacctatgcggaaacccgtcgcctg
tacggcaaagaggcgtatcaccgtccgtcgcgctttatcgccgaactgccggaaggctgt
gtggaagaggtgcgcctgcgcgcgagcgtcagccgtccggtcagccataagcagctgggc
gcgccgatagcgcagaacgattccggctataagctcggtcagcgcgtgcgtcacccgaaa
ttcggcgaaggcaccatcgtgaatctcgaaggcagcggcgaacacagccggttgcaggtg
gcgttcaacggtcagggcatcaaatggctggtggccgcttacgcgcgcctcgaaaccgtc
tga
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