Cronobacter universalis: AFK65_01595
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Entry
AFK65_01595 CDS
T04063
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cui
Cronobacter universalis
Pathway
cui03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFK65_01595 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cui03021
]
AFK65_01595 (rpoB)
03400 DNA repair and recombination proteins [BR:
cui03400
]
AFK65_01595 (rpoB)
Enzymes [BR:
cui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFK65_01595 (rpoB)
Transcription machinery [BR:
cui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AFK65_01595 (rpoB)
DNA repair and recombination proteins [BR:
cui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AFK65_01595 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ALB53422
UniProt:
A0AAC8ZQI9
LinkDB
All DBs
Position
339649..343677
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALDYTTEQILDLFFEKVVFEIRDNKLQME
LIPERLRGETASFDIEANGKIYVEKGRRITARHIRQLEKDEIKHIEVPVEYIAGKVAAKD
YVDASTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYMSETVRVDPTTDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKADIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANTNLTEEGRFADDLVTCRSKGESSLFSADQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLNEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIRAVLIAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKRQEEVAK
LREFIQKAYDLGQDVRQKVDLNTFSDEEVLRLAENLRKGMPLATPVFDGAKEAEIKELLQ
LGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccgcaa
gttctggatgttccctatctcctttctatccagcttgactcgttccagaaatttatcgag
caagatcctgagggtcagtacggtctggaagcggctttccgctccgtattcccgattcag
agctacagcggcaattcggaactgcagtacgtcagctaccgtcttggcgaacctgtcttt
gatgttaaagaatgccagatccgtggcgtgacctattcggcaccgctgcgcgttaagctg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacatcaaagagcaa
gaagtttacatgggcgaaattccgctcatgaccgataacggtaccttcgtcatcaacggt
actgagcgtgttatcgtttctcagctgcaccgtagcccgggcgtgttctttgacagtgac
aagggcaaaacccactcctctggtaaggtgctgtataacgcacgcatcattccttaccgt
ggctcctggctggacttcgagttcgatcctaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagctgccggcaactatcatcctgcgcgcgctggattacaccactgagcagatt
cttgacctgttcttcgagaaagtggttttcgaaatccgcgacaacaagctgcagatggag
ctgattccggagcgtctgcgtggtgaaaccgcatcctttgatatcgaagcaaacggcaaa
atttacgtagaaaaaggccgtcgtatcactgcgcgtcatatccgccagctcgaaaaagac
gaaatcaaacacatcgaagttccggtggaatacatcgccggtaaagtcgcagcgaaagat
tacgtggatgcttccactggcgagctgatttgcccggccaacatggagctgtccctggat
ctgctggcgaagctgagccagtctggtcacaaacgtatcgagacactgttcaccaacgac
ctcgatcacggcccgtacatgtctgagaccgtacgcgtcgacccgaccaccgatcgcctg
agcgcgctggttgaaatctaccgcatgatgcgtcctggcgagccgccgacgcgtgaagcg
gcggaaagcctgtttgagaacctgttcttctctgaagatcgttacgatctgtctgcggtt
ggccgcatgaagttcaaccgttctctgctgcgcgacgagattgaaggttccggtatcctg
agcaaagctgacatcatcgacgtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggcaaccgtcgtatccgttccgttggcgaaatggcg
gaaaaccagttccgcgttggcctggtgcgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgccgcaggatatgatcaacgccaagcctatctccgct
gcggtgaaagagttcttcggctccagccagctttcccagtttatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctctgcgctcggcccgggcggtctgacgcgt
gaacgcgcaggcttcgaagttcgagacgtacacccgacccactacggtcgcgtatgtcct
atcgaaacgccggaaggtccgaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgagtatggcttccttgagacgccgtaccgtaaagtgaccgacggtgtggtgacc
gatgaaattcattacctctccgctatcgaagaaggtaactacgttatcgctcaggcgaac
accaacctgaccgaagaaggccgcttcgccgatgatttggtcacctgccgcagcaaaggc
gaatccagcctcttcagcgcagaccaggttgactatatggacgtttccacccagcaggtg
gtttccgtcggtgcgtccctgatcccgttccttgagcacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcggttccgactctgcgcgctgataagccgctggta
gggaccggtatggaacgtgctgttgccgttgactccggtgtaaccgccgttgcgaaacgt
ggcggtaccgttcagtacgtggatgcatcccgtatcgttatcaaagttaacgaagacgag
atgtacccgggcgaagcaggtatcgacatctataacctgactaaatacacccgttctaac
cagaacacctgcatcaaccagatgccgtgcgtgtctctgaatgaaccggttgagcgcggc
gacgtgctggcagacggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggctacaacttcgaagactccatcctcgtttccgag
cgtgtggtccaggaagaccgtttcaccacgattcacatccaggaactggcgtgcgtatct
cgcgataccaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagct
gcgctctccaaactcgatgaatccggtatcgtctacatcggcgcggaagtgaccggcggc
gacattctggtgggcaaggttaccccgaaaggtgaaacccagctgacgccggaagagaaa
ctgctgcgtgcaatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgtg
ccgaacggcgtttccggtacggttatcgacgttcaggtctttacccgcgatggtgtggaa
aaagacaaacgtgcgctggaaatcgaagaaatgcagctcaagcaggccaaaaaagacctg
tctgaagaactgcagatcctcgaagcgggtctgttcagccgtattcgcgctgtcctgatc
gcaggcggcgtcgaagctgagaagctcgacaaactgccgcgcgaccgctggctggaactc
ggcctgaccgacgaagagaaacagaatcagctggaacagctggctgagcagtacgacgag
ctgaagcacgagtttgagaagaaactcgaagcgaaacgccgcaaaatcacccagggcgac
gatctggcgccgggcgtgctgaagatcgttaaggtgtatctggccgttaaacgtcagatc
cagccgggcgataagatggcaggccgccacggtaacaaaggtgttatctccaagatcaac
ccgatcgaagatatgccttacgatgaaaacggcacgccggtagatatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcctggaaactcacttgggtatggcg
gcgaaaggtatcggcgacaagatcaacgccatgctgaagcgtcaggaagaagtcgcgaaa
ctgcgcgaattcatccagaaagcttacgacctcggccaggatgttcgtcagaaagttgac
ctgaacaccttcagcgacgaagaagtactgcgtctggctgaaaacctgcgtaaaggtatg
ccgctcgccacgccggtattcgacggcgcgaaagaagctgagattaaagagctgctgcag
ctgggcgacctgccgacttccggtcagatcaccctgttcgacggccgtacgggtgaacag
ttcgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggttgac
gacaagatgcacgctcgttccaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggccagcgcttcggtgagatggaagtgtgggcgctggaagct
tacggcgccgcctataccctgcaggaaatgcttaccgttaagtctgatgacgtgaacggc
cgtaccaagatgtataagaacatcgtggatggcaaccatcagatggaaccgggcatgccg
gaatcgttcaacgtactgttgaaagagattcgttcgctgggcatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
