Cronobacter universalis: AFK65_01600
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Entry
AFK65_01600 CDS
T04063
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cui
Cronobacter universalis
Pathway
cui03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFK65_01600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cui03021
]
AFK65_01600
03400 DNA repair and recombination proteins [BR:
cui03400
]
AFK65_01600
Enzymes [BR:
cui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFK65_01600
Transcription machinery [BR:
cui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AFK65_01600
DNA repair and recombination proteins [BR:
cui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AFK65_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ALB53423
UniProt:
A0AAC8ZQH1
LinkDB
All DBs
Position
343754..347977
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERSQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEAECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDANGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEQWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRL
SNAKSVVNSSGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVQAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIMNAGSSEFLEGEQVEYSRVKIANRELEANGKVSATYMRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGNDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcctcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtacctttaagccggagcgcgacggtctgttttgcgcccgt
atctttgggccggtaaaagactatgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatttgtgagaagtgcggcgttgaagtgacccagactaaagtgcgtcgtgag
cgcatgggccacatcgagctggcttccccgactgcccacatctggttcctgaaatctctg
ccgtcccgtatcggtctgctgctggatatgccgctgcgcgatatcgaacgcgtactgtat
tttgaatcttacgtggttatcgagggtggcatgaccaacctcgagcgcagccagatcctg
actgaagagcagtacctggacgcgctggaagagttcggtgacgaattcgacgcgaaaatg
ggcgccgaagctatccaggctctgctgaaaagcatggatctggaagccgagtgcgagcag
ctgcgcgaagagctgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgc
atcaagctgctggaagcgttcgtacagtctggcaacaagccggagtggatgatcctgacc
gtgctgccggtgctgccgccggatctgcgtccgctggttccgctggatggcggtcgtttc
gcaacgtcggatctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgtctgctggatctcgctgcgccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggtagacgccctgctggataacggccgtcgcggtcgcgcgatcaccggctccaac
aagcgtccgctgaaatcccttgccgacatgatcaaaggtaagcaggggcgtttccgtcag
aacctgctcggtaagcgcgtggactactctggtcgttccgtaattaccgtaggtccgtac
ctgcgtctgcatcagtgcggcctgccgaagaaaatggcgctggaactgttcaaaccgttc
atctacggcaagctggaactgcgtggcctcgcgactaccatcaaagccgccaagaaaatg
gttgagcgtgaagaagcggtcgtgtgggatatcctggacgaagttatccgtgagcacccg
gtactgctgaaccgtgcgccgaccctgcaccgtctgggtattcaggcgttcgaaccggta
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcatacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagcttgaagcg
cgcgcgctgatgatgtctaccaacaacattctgtctccggcgaacggcgaaccaatcatc
gttccttctcaggacgttgtactgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggccctaaagaagccgagcgtatctatcgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgaatatgaaaaagatgcaaac
ggcgaattcgttgcgaaaaccagcctgaaagacacgactgttggccgtgccattctgtgg
atgatcgtaccgaaaggtctgcctttctccatcgtcaaccaggcgctgggcaagaaagct
atctccaaaatgctgaacacctgttaccgcattctgggcctgaagccgaccgttatcttt
gctgaccagaccatgtacaccggttttgcctatgcagcgcgctctggcgcgtccgtaggt
atcgacgacatggttattccggagaagaaacacgagatcatctccgaagcggaagccgaa
gtggccgagatccaggagcagttccagtctggtctggttaccgcgggcgaacgctacaac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgtgattaaccgtgacggcgtagaagagcagcaggtttccttcaac
agcatttacatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctt
gcgggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctcgacccacggcgcgcgt
aaaggtctggcggataccgcactgaaaaccgcgaactccggttatctgacccgtcgtctg
gttgacgtggcgcaggatctggtggtgaccgaagacgattgcggcacgctggaaggcatc
accatgaccccggttatcgagggtggcgatgttaaagagccgctgcgcgatcgcgtactg
ggtcgtgttaccgcggaagacattctgaagccgggtaccgcagacattctggttccacgc
aacaccctgctgcacgaacagtggtgtgacctgctggaagcgaactctgttgactccgtg
aaagtgcgttccgttgtatcctgtgacaccgatttcggtgtatgtgcgcactgctatggt
cgagatctcgcgcgtggccacatcatcaacaaaggtgaagccatcggcgttatcgcggca
cagtccatcggtgagccgggtactcagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatccgtctg
agcaatgcgaagtcggttgttaactccagcggtaagctggtggtgacttcccgtaacacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtgccttacggc
gcagttatggcgaagggtgatggcgagcaggttgccggcggtgaaaccgttgcaaactgg
gatccgcacaccatgccggttatcaccgaagtcagtggtttcatccgcttcactgacatg
attgacggccagaccattactcgtcagaccgacgaactgaccggtctgtcttctctggtg
gttctggattccgctgaacgtaccgcgggcggtaaagatctgcgtccggcgctgaaaatc
gttgatgctcagggtaacgacgttctgatcccgggtaccgatatgccggcacagtacttc
ctgccgggtaaagcgattgtacagctggaagatggcgtacagattagctctggtgacacc
ctggcgcgtattcctcaggaatccggcggtaccaaggacatcaccggtggtctgccacgc
gttgctgacctgttcgaagcgcgtcgtccgaaagagccggcaatcctggctgaaatcagc
ggcatcatctccttcggtaaagagaccaaaggtaaacgccgtctggttatcaccccggta
gatggcagcgagccgtacgaagagatgattcctaagtggcgtcagctcaacgtgttcgaa
ggtgaacgcgtagaacgcggtgatgtggtttccgacggtccggaagcgccgcatgacatt
ctgcgtctgcgtggcgttcaggctgtgacccgttacatcgttaacgaagtgcaggacgtt
taccgtctgcagggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagccaccatcatgaacgcaggcagctccgagttcctggaaggtgagcaggtg
gaatactctcgcgtcaagatcgccaaccgcgaactggaagcgaacggcaaagtcagcgcg
acttacatgcgcgacctgctgggtatcaccaaagcgtctctggccaccgagtccttcatc
tccgcggcatcgttccaggagaccactcgcgtgctgaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggtctgaaagagaacgttattgtgggtcgtctgatcccggccggt
accggttacgcgtaccaccaggatcgtatgcgccgtcgcgctgcgggtgaactcccggca
gcaccgcaggtgactgcggaagacgcgtctgcaagcctggcagaactgctgaacgcaggt
ctgggcggcaacgacaacgagtaa
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integrated database retrieval system
