KEGG   Cronobacter universalis: AFK65_02020
Entry
AFK65_02020       CDS       T04063                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cui  Cronobacter universalis
Pathway
cui02020  Two-component system
cui02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cui00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AFK65_02020
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AFK65_02020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cui03021]
    AFK65_02020
Transcription machinery [BR:cui03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AFK65_02020
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID DUF6189
Other DBs
NCBI-ProteinID: ALB53495
UniProt: A0AAC8ZQJ6
LinkDB
Position
complement(439666..441105)
AA seq 479 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQE
TQTSEGLDTAEALEQKEMPDELPLDASWDEIYTAGTPSGTGTDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATAIVDAVDDTGYLTVTVQDILDGMGNSDDDIGLEEIEAV
LKRVQRFDPVGVAARDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRV
TRLKEDVLKEAVTLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNDRWTVELNADSLPRLK
INQQYAAMSGSARNESDSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQG
EEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASST
AIRALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactaaggcttagccaacagctcgccatgacgccgcagttgcag
caggccatccgcttgttgcaattgtccacgctggagcttcaacaggagctgcaacaggcg
ctggagagcaatcccctgcttgaacaaaccgacattcacgacgaaattgccactcaggaa
acgcagaccagcgaagggctggacaccgccgaagcgctggagcaaaaagagatgccggac
gagctgccgcttgacgccagctgggacgagatctacaccgccggcacgccgtcgggcacc
ggcactgactatatcgacgacgaattgcctgtctatcagggcgaaaccacccaaagcttg
caggactacctgatgtggcaggtggaactgacgccgttttccgataccgatcgcgccatc
gccacggcgatcgtcgacgcggtggacgacaccggctatctcaccgtgacggtgcaggat
attctcgacggcatgggcaatagcgatgacgacattggtctggaagagatcgaagccgtg
cttaagcgcgttcagcgtttcgatccggtaggcgtcgccgcccgcgatctgcgcgactgc
ctgctaatccagctctcgcagttcagcgctgaaacgcccttcctggcgcaggcgcgccag
atcgtcagcgatcatctcgatttgctggccaatcatgacttccgcagcctgatgcgcgtc
acgcgccttaaagaagatgtattgaaagaagccgtgactcttattcagtcgctcgatccg
cgccctggacagtcgatccagaccggcgagccggaatatgtcatcccggatgtcctggtg
cgcaagcataacgaccgctggaccgtcgagctcaacgccgacagccttccccggctcaaa
atcaatcagcagtacgccgccatgtccggcagcgcgcgcaatgaatccgacagccagttc
atccgcagcaatctccaggaggccaaatggcttatcaaaagcctggagagccgtaacgac
acgctgctgcgcgtcagccgctgcatcgtcgaacagcagcaggcgttctttgaacagggc
gaagagtatatgaagccgatggtgctggccgatattgctcaggcggtcgagatgcatgaa
tccactatctcccgcgtcaccacgcaaaaatatctgcacagcccgcgcggcatctttgaa
ttaaagtattttttctcaagccacgtaaacaccgagggcggcggcgaagcctcgtccacg
gccatccgcgcgctggtgaaaaagttgattgcagcggaaaaccccgcgaaacccttaagc
gacagcaagcttacgtctatgctgtcagaacaggggatcatggtggcccgccgtaccgtt
gcgaagtatcgagaatctttatccataccgccgtcaaaccagcgcaaacagctggtctga

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