Cronobacter universalis: AFK65_02020
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Entry
AFK65_02020 CDS
T04063
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
cui
Cronobacter universalis
Pathway
cui02020
Two-component system
cui02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFK65_02020
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AFK65_02020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cui03021
]
AFK65_02020
Transcription machinery [BR:
cui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFK65_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF6189
Motif
Other DBs
NCBI-ProteinID:
ALB53495
UniProt:
A0AAC8ZQJ6
LinkDB
All DBs
Position
complement(439666..441105)
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AA seq
479 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQE
TQTSEGLDTAEALEQKEMPDELPLDASWDEIYTAGTPSGTGTDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATAIVDAVDDTGYLTVTVQDILDGMGNSDDDIGLEEIEAV
LKRVQRFDPVGVAARDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRV
TRLKEDVLKEAVTLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNDRWTVELNADSLPRLK
INQQYAAMSGSARNESDSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQG
EEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASST
AIRALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactaaggcttagccaacagctcgccatgacgccgcagttgcag
caggccatccgcttgttgcaattgtccacgctggagcttcaacaggagctgcaacaggcg
ctggagagcaatcccctgcttgaacaaaccgacattcacgacgaaattgccactcaggaa
acgcagaccagcgaagggctggacaccgccgaagcgctggagcaaaaagagatgccggac
gagctgccgcttgacgccagctgggacgagatctacaccgccggcacgccgtcgggcacc
ggcactgactatatcgacgacgaattgcctgtctatcagggcgaaaccacccaaagcttg
caggactacctgatgtggcaggtggaactgacgccgttttccgataccgatcgcgccatc
gccacggcgatcgtcgacgcggtggacgacaccggctatctcaccgtgacggtgcaggat
attctcgacggcatgggcaatagcgatgacgacattggtctggaagagatcgaagccgtg
cttaagcgcgttcagcgtttcgatccggtaggcgtcgccgcccgcgatctgcgcgactgc
ctgctaatccagctctcgcagttcagcgctgaaacgcccttcctggcgcaggcgcgccag
atcgtcagcgatcatctcgatttgctggccaatcatgacttccgcagcctgatgcgcgtc
acgcgccttaaagaagatgtattgaaagaagccgtgactcttattcagtcgctcgatccg
cgccctggacagtcgatccagaccggcgagccggaatatgtcatcccggatgtcctggtg
cgcaagcataacgaccgctggaccgtcgagctcaacgccgacagccttccccggctcaaa
atcaatcagcagtacgccgccatgtccggcagcgcgcgcaatgaatccgacagccagttc
atccgcagcaatctccaggaggccaaatggcttatcaaaagcctggagagccgtaacgac
acgctgctgcgcgtcagccgctgcatcgtcgaacagcagcaggcgttctttgaacagggc
gaagagtatatgaagccgatggtgctggccgatattgctcaggcggtcgagatgcatgaa
tccactatctcccgcgtcaccacgcaaaaatatctgcacagcccgcgcggcatctttgaa
ttaaagtattttttctcaagccacgtaaacaccgagggcggcggcgaagcctcgtccacg
gccatccgcgcgctggtgaaaaagttgattgcagcggaaaaccccgcgaaacccttaagc
gacagcaagcttacgtctatgctgtcagaacaggggatcatggtggcccgccgtaccgtt
gcgaagtatcgagaatctttatccataccgccgtcaaaccagcgcaaacagctggtctga
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