Cronobacter universalis: AFK65_02210
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Entry
AFK65_02210 CDS
T04063
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cui
Cronobacter universalis
Pathway
cui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK65_02210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cui03019
]
AFK65_02210
03016 Transfer RNA biogenesis [BR:
cui03016
]
AFK65_02210
Enzymes [BR:
cui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AFK65_02210
Messenger RNA biogenesis [BR:
cui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AFK65_02210
Transfer RNA biogenesis [BR:
cui03016
]
Prokaryotic type
tRNA degradation factors
AFK65_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ALB53528
UniProt:
A0AAC9EVP0
LinkDB
All DBs
Position
472747..474882
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKKAKPGQDFFPLT
INYQERTYAAGRIPGGFFRREGRPSEGETLIARLIDRPLRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKSSKLDLVVA
GTESAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINDLVKEAGKPRWDWQPEAANE
ALNARVKALAESRLSDAYRITDKQERYSQIDAIKADVIAALQAEQAEGDALDENELGDIL
HAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLG
TERDAQNIDELMGERTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPA
ADRFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFVV
LSDILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITKEIMQVALNQAKGARLHILGVM
EQAINAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKI
AATDGEKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADK
RVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTQEAAAPAAPEAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgtccgcaaatttcagtatggtcaacatactgtcactcttgaaacc
ggaatgatggctcgtcaggccactgctgccgtaatggtaagcatggatgacactgcggta
ttcgtgaccgtggttggcgctaaaaaagcgaagccgggccaggactttttcccgctgacc
attaactatcaggagcgtacctacgctgctggccgcatccctggcggtttcttccgtcgc
gaaggccgtcctagcgaaggcgaaacgctgatcgcgcgtctgattgaccgtccgcttcgt
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgcgaccgtcgtttccgtt
aacccgcaggttaacccggatatcgtcgcgatgatcggcgcgtccgccgcgctgtctctg
tccggtattccgtttaatggcccgattggtgctgcccgcgtgggttacatcaacgaccag
tacgtactgaacccgacccaggatgagctgaaatccagcaaactggatctggtggttgcc
ggtaccgaaagcgccgtgctgatggtggaatccgaagctgaactgctgagcgaagatcag
atgctgggcgctgtggtgttcggtcacgagcagcagcaggttgtgattcagaacatcaac
gatctcgtgaaagaagcgggcaaaccgcgctgggactggcagcctgaagccgctaacgaa
gcgctcaacgcgcgcgtgaaagcgctggctgaatctcgtctgagcgacgcgtaccgcatc
actgacaaacaagaacgttacagccagatcgacgctatcaaagcggacgtcatcgcggca
ctgcaggctgagcaggccgaaggcgacgcgcttgacgaaaacgagctgggcgacatcctg
cacgctatcgagaagaacgttgttcgctcccgcgtgctggctggcgagccgcgtatcgat
ggccgcgaaaaagacatgatccgtggtctggacgtgcgcaccggcgtactgccgcgcact
cacggttccgcgctgttcacccgtggtgaaacgcaggcgctggttaccgcgacgctgggt
accgagcgcgacgcgcagaacatcgacgaactgatgggcgagcgtactgaccgcttcctg
ttccactacaacttccctccgtactctgtcggcgaaaccggcatggttggttctccgaag
cgtcgtgaaatcggtcacggtcgtctggcgaaacgcggcgtactggcagtgatgccggca
gccgaccgcttcccgtacaccgttcgcgtcgtatctgaaatcaccgaatccaatggttct
tcttccatggcttccgtgtgtggcgcttctctggcgctgatggacgcaggcgtgccgatc
aaagccgctgtcgcgggtatcgcgatgggtctggtgaaagaaggcgaaaactttgtcgta
ctgtccgacattctgggtgacgaagaccacctgggcgacatggacttcaaagtggctggt
tcccgtgaaggtatcactgcactgcagatggatatcaaaattgagggcatcaccaaagag
atcatgcaggtggcgctgaatcaggctaaaggtgcgcgtctgcacattcttggcgtgatg
gaacaggctatcaacgcgccgcgtggcgatatctctcagttcgcaccgcgtattcatacc
atcaagatcagcccggacaagatcaaagacgtgatcggtaaaggcggctctgtgattcgt
gcgctgaccgaagaaaccggcaccaccatcgaaatcgaagatgacggtacggtgaaaatc
gcagcgaccgatggcgagaaagcgaaacacgcgattcgtcgtatcgaagagatcaccgct
gaaatcgaagtgggccgtatctacaatggtaaagtgacccgtatcgttgactttggtgct
ttcgtcgctatcggcggcggtaaagaaggtctggtacacatctctcagatcgccgacaag
cgtgttgagaaagtgaccgactatctgcagatgggtcaggaagtaccggttaaggtactg
gaagttgaccgtcagggccgcgtacgtctgagcattaaagaagcaaccgagcagactcag
gaagcagcagcccctgctgcgccggaagccgagtaa
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