Cronobacter universalis: AFK65_06425
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Entry
AFK65_06425 CDS
T04063
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cui
Cronobacter universalis
Pathway
cui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK65_06425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cui03019
]
AFK65_06425
Enzymes [BR:
cui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AFK65_06425
Messenger RNA biogenesis [BR:
cui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AFK65_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Rubella_Capsid
UvrD-helicase
DUF6426
Motif
Other DBs
NCBI-ProteinID:
ALB54309
UniProt:
A0A376E6S8
LinkDB
All DBs
Position
1402218..1403642
Genome browser
AA seq
474 aa
AA seq
DB search
MSFDSLGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLL
QRLTANQPHPNGRRPVRALILTPTRELAAQVGENVREYSKYLDIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDQVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKSLAEKLLRNPEEVEVARRNTASEQITQHVHFVDKKRKRELLSYLI
GDGNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKTGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKREIPRMAIAGYEPDPSIPAEPIVNGRQGRGGRGGQGGGGRGQGQPRRQNGEGNRS
SGERSRPSGERGRRQDGEGNRPSGERSRRPAGEGNRPAGNKPRTRRAPRKASGD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcactgggcttaagccctgaaattctgcgcgccattgccgagcagggt
tacaacgaaccgactccgatccagcgccaggccattccggtggtgctttcaggcaaagat
ttgatggccagcgcccagaccggcaccggcaaaaccgcaggctttacgctgccgctgctg
caacgcctgacggcgaaccagccgcacccgaacggtcgccgcccggtgcgcgcgctgatc
ctgaccccgacgcgcgaactggcagcccaggtgggcgagaacgtgcgcgaatacagcaaa
tatctcgatatccgctcgttggtggtcttcggcggcgtgagcatcaacccgcagatgatg
aaactgcgcggcggcgtggatgtgctgatcgcaacgccgggccgtctgctcgatctcgaa
caccagaacgccgtgaagctcgaccaggtggaagtgctggtgcttgatgaagccgaccgt
atgctggacatgggctttattcacgacatccgccgcgtgctggcgaagctgccggcgaag
cgtcagaacctgctgttctccgcgacgttctccgacgacattaaatcgctggcggaaaaa
ctgctgcgcaacccggaagaagtggaagtggcgcgccgcaacacggcctccgagcagatc
acgcagcatgtgcatttcgtggataaaaaacgcaagcgggaactgctttcttatctgatt
ggcgacggcaactggcagcaggtgctggtgtttacccgtaccaaacacggcgccaaccat
ctggcggagcagctgaataaagacggcattaccgccgcggctatccacggcaacaagagc
cagggcgcccgtacccgcgcgctggcggatttcaaaaccggcggcattcgcgtactggtg
gcgactgatatcgccgcgcgcggtctggatatcgaagagctgccgcacgtcgtgaactat
gagttgccgaatgtgccggaagattacgttcaccgtatcggccgtaccgggcgcgccgcc
gcgaccggcgaggcgctgtcgctggtgtgcgtcgatgagcacaaactgctgcgcgatatc
gaacgcctgctcaagcgcgagatcccgcgtatggcgattgcgggctacgagccggatccg
tctatcccggcggagcctatcgtgaacggtcgccagggccgcggcggacgcggtggtcag
ggcggcggcggtcgtggtcagggccagccgcgtcgtcagaacggcgaaggcaaccgttca
tccggcgaacgcagccgtccgtccggtgagcgtggtcgtcgtcaggatggcgaaggcaat
cgtccgtccggcgagcgttcacgtcgcccggcaggcgagggcaaccgtccggcaggcaac
aaaccgcgcacccgtcgcgcgccgcgtaaagcgtccggggattaa
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