Cronobacter universalis: AFK65_10690
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Entry
AFK65_10690 CDS
T04063
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cui
Cronobacter universalis
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cui03019
]
AFK65_10690
Enzymes [BR:
cui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AFK65_10690
Messenger RNA biogenesis [BR:
cui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AFK65_10690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
NACHT
T2SSE
nSTAND3
ResIII
AAA_16
PhoH
NTPase_1
HALZ
SLFN-g3_helicase
MCM
Motif
Other DBs
NCBI-ProteinID:
ALB55109
UniProt:
A0AAC8VQQ6
LinkDB
All DBs
Position
complement(2305368..2309273)
Genome browser
AA seq
1301 aa
AA seq
DB search
MMEKQNITLSALMARLDSLMLRDKSRFARRLHGAKKIKNTESQQALFEQLSQEMSEAAGK
VLLREAARPAITYPENLPVSQKKQDILNAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIAEELQTEPGGCVGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLRELLPKRPDLKIIITSATIDPERFSRH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVEELGREGPGDILIFMSGE
REIRDTADGLMKLNLPHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDAQ
ASVYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPLDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAGYREVHTALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL
FKKPPKWAMVAELVETSRLWGRIAARIDPEWIEPVAQHLIKRSYSEPHWERAQGAVMASE
KVTLYGLPIVAARSVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRENQKLRAEVEELE
HKSRRRDILVDDDTLFEFYDQRISVDAISARHFDSWWKQASRETPDLLNFEKSMLIKEGA
EKVSKLDYPNFWHQGNLKLRLSYQFEPGGDADGVTVHIPLPLLNQVEDAGFEWQVPGMRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTIDREAW
QAEQVPDHLKMTFRVVDEKGRKLREGKDLHALKEGLKEKVQETLSAVADDGIEQSGLHIW
SFGTLPERYEQKRGGYQVKAFPALVDEKESVGIRLFDNPQEQQHAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIAENGGPVWSETGFAQLHDK
VRAQLNDTVVDIAKQVEQILTAVFSINKRLKGRVDMTMALGLSDVKAQMSGLVYRGFVTG
NGYKRLGDTLRYLNAIEKRLEKMAVDPHRDRAQMLKVEAVQQAWQQWLNKLPPARRDDDD
VQEIRWMIEELRVSYFAQQLGTPYPVSDKRVLQAMEQVSGA
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaaacaaaatattaccctttccgccctgatggcacgtctcgactcgctgatg
ctgcgcgataaaagccgcttcgcccgtcgcctccacggggctaaaaagattaaaaatact
gaatctcagcaggcgcttttcgaacagctctctcaggagatgagcgaggcggcagggaaa
gtcctgctgcgcgaagcggcgcgcccggccattacgtatccggaaaacctgccggtcagc
cagaagaaacaggatattctcaacgccgtgcgcgaccaccaggtggtgatcgtggcgggg
gagaccggctccgggaaaacgacccagctgccgaaaatctgtatggagctggggcgcggg
gtaaaagggcttatcggccacacccagccgcgtcgcctcgcggcgcgtaccgtcgcgaac
cgcatcgccgaagaactgcaaaccgagccgggcggttgcgtcggttataaagttcgcttt
agcgatcacgtcagcgacaacaccatggtcaagctgatgaccgacgggatcctgctggcg
gagatccagcaggaccgtctgctgatgcagtacgacaccatcattatcgatgaggcgcac
gagcgcagcctgaacatcgattttctgctgggctacctgcgcgaactgctgccaaagcgc
ccggatctgaaaatcattattacctcggcgaccatcgatcctgagcgtttctcgcgccac
tttaataatgcgccgattatcgaagtctctggccgtacgtatccggttgaggtgcgctac
cggccgattgtggaagaagcagacgacaccgagcgcgatcagctgcaggcgattttcgat
gccgtggaggagcttggccgcgaagggccgggcgatatcctgatctttatgagcggcgag
cgcgaaatccgcgacaccgccgacggcctgatgaagctcaacctgccgcacaccgaggtg
ctgccgctctatgcgcggctctcaaacagcgagcagaaccgcgtctttcagtcgcattcc
gggcgacgcattgtgctggcgaccaacgtggcggaaacctcgctgaccgtgccgggcatt
aaatatgtgatagaccccggtacggcgcgtatcagccgctacagctaccgcaccaaagtg
cagcgtctgccgatcgagccggtgtcgcaggcgtccgccaaccagcgtaaaggccgctgc
gggcgcgtctcggaaggcatctgtattcgcctctattcggaagacgattttctctcgcgc
ccggaatttaccgacccggaaatcctgcgcactaacctggcgtccgttattctgcaaatg
acggcgctggggcttggcgacatcgccgcgttcccgtttgtcgaagcgccggataagcgc
aacattcaggacggcgtgcgcctgctggaggagctcggcgctatcaccaccgacgcgcag
gcgtcggtctataaactgacgccgctgggccgtcagctgtcgcaactgccggtggacccg
cgtctcgcgcgcatggtgcttgaggcgcaaaagcatggctgcgtgcgcgaggcgatgatc
atcacctcggcgctgtcgattcaggacccgcgcgagcggccgctcgataaacagcaggcg
tcggatgaaaaacaccgccgcttccatgataaagagtccgattttctggctttcgtgaac
ctgtggaattacctcggcgagcagcagaaagcgctctcgtccaatcagttccgccgtctg
tgccgtaccgattaccttaattacctgcgggtgcgcgaatggcaggatatctacacccag
ctgcgccaggtggtgaaagagctgggcattccggtaaacagcgaaccggcgggctaccgc
gaggtgcacacggcgctgttgaccggcctgctgtcgcacatcggcatgaaagacgccgat
aaacaggaatacaccggcgcgcgcaacgcccgtttctctattttcccgggctcggggcta
tttaaaaagccgccgaagtgggcaatggtggcggagctggtggaaaccagccggctgtgg
ggccgcatcgcggcgcgtatcgatccggagtggatcgagccggtggcgcagcacctcatt
aagcgctcatacagcgagccgcactgggagcgcgcgcagggcgccgtgatggcgagcgag
aaagtgacgctctacggcctgccgatcgtggccgcgcgcagcgtcaactacagccagatc
gatccggcgctttcccgcgagctgtttatccgtcatgcgctggtggaaggcgactggcag
acgcgccacgcctttttccgcgagaaccagaagctgcgcgccgaagtggaggagctggag
cataaatcgcgtcgccgcgacattctggtggacgacgacaccctgttcgagttttacgat
cagcgcatcagcgtagatgcgatttccgcccgccacttcgacagctggtggaagcaggcg
agccgcgagacgccggatctgctcaattttgaaaagagcatgttgatcaaagagggcgcg
gagaaggtcagcaagcttgattacccgaacttctggcatcagggcaacctgaagctgcgc
ctgtcgtatcagtttgagccgggcggcgacgccgacggcgtgacggtgcatattccgctg
ccgctgttaaaccaggtggaagacgcgggcttcgaatggcaggtgccgggaatgcgccgc
gaactcatcatcgcgctgattaaatcgctgccaaaacccgtgcgccgcaatttcgttccg
gcgcccaactacgccgaggcgtttttaggccgcgttacgccgctggagctgccgctgctg
gacgcgctggagcgcgaactgcgccgcatgaccggcgtgacgattgaccgcgaggcgtgg
caggccgaacaggtgcccgatcatcttaaaatgaccttccgggtggtggatgagaaaggc
cgcaagctgcgcgagggcaaagatctccacgcgctgaaagaggggctgaaagagaaagtg
caggagacgctttcggcggtggcggatgacggcattgagcagagcgggctgcatatctgg
agcttcggcacgctgcctgagcgttatgagcagaagcgcggcggctaccaggtgaaagcg
ttcccggcgctggtggatgagaaagagagcgtcggcatccggctgttcgataatccgcag
gagcagcagcacgccatgtggcgcggcctgcgccgtctgctgctgctgaacattccgtcg
ccgattaaatatctgcacgagaaactgccgaacaaagccaagctggggctctatttcaac
ccgtacggcaaggtgctggatctgattgacgactgcatctcctgcggcgtcgataagctt
atcgccgagaacggcgggccggtatggagcgaaacgggctttgcgcagcttcacgataaa
gtgcgcgcgcagctgaacgacactgtggtggatatcgcaaaacaggttgaacagatcctg
acggcggtctttagcatcaataagcgcctgaaagggcgcgtggatatgacgatggcgctc
ggcctgtccgatgtcaaagcccagatgagcgggctggtgtaccgcggttttgtgaccggc
aacggttataagcgcctcggcgatacgctgcgttatctcaacgccattgaaaaacggctt
gagaaaatggccgtcgacccgcaccgcgaccgcgcgcagatgctgaaagtggaagccgta
cagcaggcgtggcagcagtggctcaataaactgccgcccgcgcgtcgcgatgacgacgac
gtacaggagatccgctggatgatcgaggagctgcgcgtgagttatttcgcccagcagctc
ggcacgccatacccggtatccgataagcgcgtgttacaggcgatggagcaggtgagcggg
gcgtaa
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integrated database retrieval system
