Cronobacter universalis: AFK65_10980
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Entry
AFK65_10980 CDS
T04063
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cui
Cronobacter universalis
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cui03016
]
AFK65_10980
Enzymes [BR:
cui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AFK65_10980
Transfer RNA biogenesis [BR:
cui03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AFK65_10980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
ALB55163
UniProt:
A0AAC9EW85
LinkDB
All DBs
Position
2370528..2372462
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
IAVIHTEKEKESAEPEELIEPFLTRFVGRVQKKDDRLSIVPDHPLLKDAIPCRAERGVSH
DFQNGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEREAPDGVAT
EMLDENLTREDLTALDFVTIDSASTEDMDDALYVEALEGDRLQLTVAIADPTAWIAEGSK
LDNIAKVRAFTNYLPGFNIPMLPRELSDDLCSLREGEQRPALVCRMIIDADGAISDDIHF
FAATIESKAKLAYDDVSDWLEEKGDWQPGSEAIAAQIRLLQQICQRRSAWRTEHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHAGFD
PASTEQLATLLQSHGMHVDANDVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESASRPQEASTVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSVIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgcttgcgcagcttaaacagcaactgcattcccagacgccg
cgcgccgaaggggtagtaaaagccacggaaaaaggttttggtttccttgaggttgacgcg
cagaaaagttacttcattccgcctccgcagatgaagaaagtgatgcacggcgatcgcgtc
attgccgttatccatacggaaaaggaaaaagaatccgccgagcccgaagagcttatcgaa
cccttcctgacccgctttgtgggccgggtgcaaaagaaagacgatcgtctctctatcgtt
cccgatcatccgctgctgaaagacgccatcccgtgccgcgctgaacgcggcgtcagccat
gattttcagaatggcgactgggcggtggcggagatgcgccgtcatccgctgaaaggcgat
cgcggcttctacgcggaactgacccagtttattaccttcggcgacgaccatttcgtgccg
tggtgggtgacgcttgcccgccacaatcttgagcgcgaagcgccggacggcgtggcgacc
gaaatgctggatgaaaacctgacgcgtgaagatttaaccgcgctcgatttcgtcactatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgtcgaagcgctggagggcgac
cgcctgcagctgaccgtcgcgattgccgatccgaccgcgtggatcgccgaaggcagcaag
ctcgacaacatcgccaaagtgcgcgcgttcaccaactacctgccgggctttaacatcccg
atgctgccgcgcgagctttccgacgatctctgctcgctgcgcgaaggcgaacagcgcccg
gcgctggtctgccgcatgattatcgacgccgacggcgctatcagcgacgacattcacttc
ttcgcagcgaccatcgaatcgaaagccaaactggcgtatgacgatgtctctgactggctg
gaagaaaaaggcgactggcagccgggcagcgaggcgattgccgcgcagatccgcctgctg
cagcagatttgccagcgccgcagcgcctggcgtaccgaacatgcgctggtgtttaaagac
cgcccggattaccgctttgtgcttggcgaaaaaggcgaagtgctggatatcgtggccgag
ccgcgccgtatcgctaaccgtatcgttgaagaatcgatgattgccgcgaacatctgcgcc
gcgcgcgtgctgcgcgacaagctgggcttcggcgtgtataacgtgcacgcaggcttcgac
ccggccagcaccgaacagctggcgacgctgctgcaaagccacggcatgcatgtggatgcg
aacgacgtgctgaccctgccaggcttctgcaagctgcgccgcgaactcgacgcgcagccg
tccggcttcctcgacagccgcatccgccgtttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcacttcggcctgggcctcgaagcatacgcgacctggacttcgccgatccgt
aaatatggcgatatggttaaccaccgtctgctgaaagccatcattaaaggcgaaagcgcg
tcacgtccgcaggaagcgtccaccgtacagatggccgagcgccgtcgtctcaaccgcatg
gcggagcgagacgtgggcgactggttgtatgcccgtttcctgaaagacaaagccggcacc
gatacccgcttcgcggcggaaattatcgatgtcagccgcggcggcatgcgcgtgcgtctg
gtggataacggcgcggtcgcctttattcctgcgccgttcctgcacgcggtgcgcgatgag
ctggtctgcagccaggaaaacggcaccgtacagatcaaaggcgaaaccgtctataaagtg
accgatgttatcgacgtgaccatcgccgaagtgcgtatggaaacccgcagcgtgatcgca
cgcccggtcgcctga
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