Cronobacter universalis: AFK65_11685
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Entry
AFK65_11685 CDS
T04063
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cui
Cronobacter universalis
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cui03016
]
AFK65_11685
Enzymes [BR:
cui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AFK65_11685
Transfer RNA biogenesis [BR:
cui03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AFK65_11685
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DUF3253
Motif
Other DBs
NCBI-ProteinID:
ALB56932
UniProt:
A0AAC8ZSS9
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All DBs
Position
complement(2529216..2530325)
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AA seq
369 aa
AA seq
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MITTNDALATLCETARTQRALALDTEFVRTRTYYPQLGLIQLYDGENVALIDPLTITDWA
PFQALLQDQNVNKFLHAGSEDLEVFQNAFGMMPDPFIDTQVLASFVGHPLSCGFATLVEH
HTGVALDKSESRTDWLARPLTERQCDYAAADVWYLLPIAHKLMEQVRDAGWLTAAINECR
LMTQRRGEVLDPDEAWREITNAWQLRPRQLACLKLLAGWRLRKARERDMAVNFVVREENL
WKVARHMPGSLGELDGLGLSGSEIRFHGKTLLALVGEAQALPEDALPEPLSNLVDMPGYR
KVFKEIKALVQETSEAHKISAELMASRRQINQLLNWHWKLKPQNQLPELISGWRGELLGD
ALKTLLQHY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgattaccaccaatgacgcgctggcgacgctgtgcgagaccgcacgcacgcagcgcgcc
ctggcgctggacaccgaatttgtccgtacccgtacttactatccgcagctggggctcatc
cagctgtatgacggcgaaaacgtcgcgttgatcgatccgctgaccattaccgactgggcg
ccttttcaggcgctgttgcaggatcaaaacgtcaacaaattcctccatgcgggcagcgaa
gatctggaagtgttccagaacgcgttcggcatgatgcccgatccgtttatcgacactcag
gtgctggcctcatttgtcggtcatccgctctcctgcggttttgcgacgctggtggaacat
cacaccggcgtggcgctggataaaagcgagtcgcgtaccgactggctggcgcgcccgctg
acggagcgccagtgcgattacgcggcggcggacgtctggtatctgctgccgattgcccac
aaactgatggagcaggtgcgcgacgccggctggctgaccgccgccattaacgaatgccgc
ctgatgacccagcgccgcggcgaggtgctcgatcctgacgaggcgtggcgtgaaatcacc
aacgcctggcagttgcgcccacgtcagctcgcctgcctgaagctgctggcgggctggcgc
ctgcgcaaagcgcgcgagcgcgatatggcggtgaatttcgtggtgcgtgaagaaaacctc
tggaaagtggcgcgccatatgccgggctcgcttggcgaactcgacggcctggggctgtca
ggcagcgaaatccgcttccacggcaagacgctgctggcgctggtcggcgaagcgcaggcg
ttgccggaagatgccctgccggagccgctctcgaatctggtcgacatgccgggctatcgc
aaagtgttcaaagagatcaaagcgctggtgcaggagacgagcgaggcgcacaagatcagc
gccgagctgatggcgtcgcgccgccagattaaccagttgctgaactggcactggaagctg
aaaccgcagaatcagctaccggaattaatcagcggctggcgcggcgagttattaggcgat
gcgttaaaaacgctgctgcaacattattaa
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