Cronobacter universalis: AFK65_15910
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Entry
AFK65_15910 CDS
T04063
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cui
Cronobacter universalis
Pathway
cui03410
Base excision repair
cui03430
Mismatch repair
cui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFK65_15910
03430 Mismatch repair
AFK65_15910
03440 Homologous recombination
AFK65_15910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cui03400
]
AFK65_15910
DNA repair and recombination proteins [BR:
cui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AFK65_15910
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AFK65_15910
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AFK65_15910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALB56072
UniProt:
A0AAC8VSD2
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All DBs
Position
complement(3455215..3456948)
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AA seq
577 aa
AA seq
DB search
MSKQTQLRRRSPDNSITLPDTLPPLLRRLYASRGVRGAQELERSVKGLLPWQQLCGIEDA
VAMLHDALREGLRIIVVGDFDADGATSTALSVLALRALGGSNVAYLVPNRFDDGYGLSPE
VVDQAHARGAQMILTVDNGISSHAGVARAHELGIPVLVTDHHLPGDTLPAAGAIINPNLA
ECTFPSKSLAGVGVAFYLMLALRAHLRSVGWFTEKGIPEPNLAEFLDLVSLGTVADVVPL
DANNRILIWQGLSRIRAGKCRPGIRALLEIANREAHRLTASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARMLANELDVLNQTRKEIEQGMQAEALTLCQQLERSGETLPSGIAI
FHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGILKGSGRSVQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEARFPEFQARFAGLVNDWLDPAMLQGEIWSDGALAPQEMTLE
VAEMLRDAGPWGQMFPEPLFDGRFRILQQRLVGERHLKLMLEPVGGGPLLDGIAFNVDTT
CWPDPGVREVELAYKLDVNEFRGNRSLQLIIDHLWPV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacagacacaacttcgcaggcgctccccggataactccattacgctgccggat
actttaccgccgctgctccgcaggctctatgccagtcgcggggtgcgcggcgcgcaggag
cttgagcgcagcgtaaaaggcctgctgccctggcagcagctctgcggaattgaagacgcg
gtggcgatgttgcatgacgcgctgcgcgaagggctgcgtatcatcgtggtcggcgatttc
gatgcggacggcgcgaccagtaccgcgctgagcgtgctggcgcttcgcgcgcttggcgga
agcaatgtggcgtatctggtgcctaaccggtttgatgatggctacggcctcagcccggaa
gtggtcgatcaggcccacgcgcgtggcgcgcaaatgatcctgaccgttgataacggcatc
tcgtcccatgcgggcgttgcgcgcgcgcatgaactgggcattccggtgctggttaccgat
caccatttgcccggcgatacgctgccagccgcgggcgctatcatcaacccgaacctggcg
gagtgtacgttcccgtcgaaatcgctcgcaggggtcggcgttgcgttttatctgatgctg
gcgctgcgcgcgcatttacgaagcgtcggctggtttacggaaaagggtattccggagccg
aatctcgcggagtttctcgatctggtgtcgctcggcacggtcgcggacgtggtgccgctg
gatgccaacaaccgcattcttatctggcaggggctgagccgcattcgtgccgggaaatgc
cgcccgggcattcgcgcgctgcttgagatagccaatcgcgaggcgcaccgcctgacggca
agcgatctcggcttcgcgctggggccgcggcttaacgcggcaggcaggctggatgatatg
tccgtgggcgtcgcgctgcttctgtgcgacaacatcggcgaggcgcgcatgctggcaaac
gagctggacgtgctgaaccagacccgtaaagaaattgagcaggggatgcaggcggaagca
ttaacgctctgccagcagcttgagcgcagcggcgaaacgctgccgagcggcattgcgatt
ttccatcctgaatggcatcagggcgtggtcggcattctcgcctcgcgcattaaagagcgc
tttcatcgcccggttatcgcgttcgcgcctgcgggcgaggggatactcaaaggttcgggc
cgttcggtgcagggcctgcatatgcgcgacgcgctggagcgtctcgacacgctctatccc
ggcatgatgcttaagttcggcggccatgcgatggcggcggggctttcgcttgaagaggcg
cgtttcccggagtttcaggcgcgtttcgccggactggttaacgactggttagatccggcg
atgctacaaggcgaaatctggtctgatggggcgctcgcgccgcaggagatgacgctggaa
gtggcggagatgctgcgcgacgccggtccgtgggggcagatgttcccggagccgctgttt
gacgggcgttttcgcattctgcaacagcgtctggtcggcgagcggcacctcaagctgatg
ctggagccggtcggcggcgggccgctgcttgacggcatcgcgtttaacgtcgacaccacc
tgctggccagaccctggcgtgcgcgaagtggagcttgcctataagcttgatgtgaatgag
tttcgcggcaaccgcagcctgcaattaattatcgaccatctctggcccgtttag
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