Cronobacter universalis: AFK65_16355
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Entry
AFK65_16355 CDS
T04063
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
cui
Cronobacter universalis
Pathway
cui02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AFK65_16355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cui03021
]
AFK65_16355
Transcription machinery [BR:
cui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFK65_16355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_ligase_A_N
D27-like_C
HTH_SUN2
TMPIT
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
ALB56159
UniProt:
A0A376EUR3
LinkDB
All DBs
Position
3551081..3552925
Genome browser
AA seq
614 aa
AA seq
DB search
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAENSNSTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITGFVDPNAEEDLAPTA
THVGSELSQEEMDDDEDEDEESDDDSSDDDNSIDPELAREKFGELRTQYEVTRDTIKAKG
RSNAASQEEILKLSEVFKQFRLVPKQFDYLVNSMRIMMDRVRTQERIIMKMCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVAEDVHRSLQKLQQIEEETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagcttaagcttcttgtcacccgtggtaaggagcagggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgatcag
atcgaagacatcatccaaatgattaacgacatgggcatccaggtgatggaagaagcgccg
gacgccgacgatctgttgcttgctgaaaactcaaacagcaccgacgaagacgcggaagaa
gctgcggcccaggtgctctcaagcgttgaatctgaaatcgggcgcaccactgacccggtt
cgtatgtacatgcgtgaaatgggtaccgttgaactgttgacccgcgaaggcgaaattgac
atcgctaaacgcatcgaagacggtatcaaccaggttcagtgctccgtcgccgaatacccg
gaagcgatcacctatctgctggagcagtacgatcgcgttgaagcgggcgaagcgcgtctt
tccgatctgatcaccggctttgtcgatccgaacgccgaagaagatctggcgcctaccgcg
acgcatgtcggctcagaactctctcaggaagagatggatgatgacgaagatgaagacgaa
gagtctgacgacgacagcagcgatgacgacaacagcatcgacccggaactggcccgtgag
aaattcggcgagctgcgtacccagtacgaagtgacccgcgacaccatcaaagccaaaggc
cgcagcaacgcggcgtctcaggaagagatcctgaagctttccgaggtgttcaaacagttc
cgcctggtgccgaagcagttcgactatctggtgaacagcatgcgcatcatgatggatcgc
gtgcgtacccaggaacgtatcatcatgaagatgtgcgttgaacagtgcaaaatgccgaag
aagaatttcatcaccctcttcaccggcaacgaaaccagcgaaacctggtttaacgcggct
atcgccatgaacaaaccgtggtctgaaaagctccacgacgtggcggaagatgttcaccgc
agcctgcaaaaactgcagcagatcgaagaagaaaccggcctgaccattgagcaggttaaa
gatatcaaccgtcgcatgtctatcggcgaagcgaaagcgcgccgtgcgaagaaagagatg
gtggaagcaaacttacgtctggttatttctatcgccaagaaatacaccaaccgcggtctg
cagttcctcgatctgattcaggaaggcaacatcggtctgatgaaagcggtagataaattc
gaataccgccgcggctacaagttctccacctatgcgacctggtggatccgtcaggcgatt
acccgctctatcgcggatcaggcgcgcaccatccgtattccggtgcacatgattgagacc
atcaacaagctcaatcgtatctcccgccaaatgctgcaggagatgggccgcgagccgacg
ccggaagagctggccgaacgcatgctgatgccggaagacaaaattcgcaaagtgctgaaa
atcgccaaagagcctatctccatggaaacgccaatcggcgacgatgaagattcgcatctg
ggggatttcatcgaggataccaccctcgagctgccgctggactccgcgaccaccgaaagc
ctgcgtgcggcgacgcacgacgtgctggccggtctcaccgcgcgtgaagcgaaagtgctg
cgtatgcgtttcggtatcgacatgaacaccgaccatacgctggaagaagtgggtaaacag
ttcgacgtgacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaagctgcgc
catccgagccgctctgaagtgctgcgcagcttcctggacgattaa
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