KEGG   Cronobacter universalis: AFK65_16355
Entry
AFK65_16355       CDS       T04063                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
cui  Cronobacter universalis
Pathway
cui02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cui00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AFK65_16355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cui03021]
    AFK65_16355
Transcription machinery [BR:cui03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AFK65_16355
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DNA_ligase_A_N D27-like_C HTH_SUN2 TMPIT BLOC1_2
Other DBs
NCBI-ProteinID: ALB56159
UniProt: A0A376EUR3
LinkDB
Position
3551081..3552925
AA seq 614 aa
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAENSNSTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITGFVDPNAEEDLAPTA
THVGSELSQEEMDDDEDEDEESDDDSSDDDNSIDPELAREKFGELRTQYEVTRDTIKAKG
RSNAASQEEILKLSEVFKQFRLVPKQFDYLVNSMRIMMDRVRTQERIIMKMCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVAEDVHRSLQKLQQIEEETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggagcaaaacccgcagtcacagcttaagcttcttgtcacccgtggtaaggagcagggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgatcag
atcgaagacatcatccaaatgattaacgacatgggcatccaggtgatggaagaagcgccg
gacgccgacgatctgttgcttgctgaaaactcaaacagcaccgacgaagacgcggaagaa
gctgcggcccaggtgctctcaagcgttgaatctgaaatcgggcgcaccactgacccggtt
cgtatgtacatgcgtgaaatgggtaccgttgaactgttgacccgcgaaggcgaaattgac
atcgctaaacgcatcgaagacggtatcaaccaggttcagtgctccgtcgccgaatacccg
gaagcgatcacctatctgctggagcagtacgatcgcgttgaagcgggcgaagcgcgtctt
tccgatctgatcaccggctttgtcgatccgaacgccgaagaagatctggcgcctaccgcg
acgcatgtcggctcagaactctctcaggaagagatggatgatgacgaagatgaagacgaa
gagtctgacgacgacagcagcgatgacgacaacagcatcgacccggaactggcccgtgag
aaattcggcgagctgcgtacccagtacgaagtgacccgcgacaccatcaaagccaaaggc
cgcagcaacgcggcgtctcaggaagagatcctgaagctttccgaggtgttcaaacagttc
cgcctggtgccgaagcagttcgactatctggtgaacagcatgcgcatcatgatggatcgc
gtgcgtacccaggaacgtatcatcatgaagatgtgcgttgaacagtgcaaaatgccgaag
aagaatttcatcaccctcttcaccggcaacgaaaccagcgaaacctggtttaacgcggct
atcgccatgaacaaaccgtggtctgaaaagctccacgacgtggcggaagatgttcaccgc
agcctgcaaaaactgcagcagatcgaagaagaaaccggcctgaccattgagcaggttaaa
gatatcaaccgtcgcatgtctatcggcgaagcgaaagcgcgccgtgcgaagaaagagatg
gtggaagcaaacttacgtctggttatttctatcgccaagaaatacaccaaccgcggtctg
cagttcctcgatctgattcaggaaggcaacatcggtctgatgaaagcggtagataaattc
gaataccgccgcggctacaagttctccacctatgcgacctggtggatccgtcaggcgatt
acccgctctatcgcggatcaggcgcgcaccatccgtattccggtgcacatgattgagacc
atcaacaagctcaatcgtatctcccgccaaatgctgcaggagatgggccgcgagccgacg
ccggaagagctggccgaacgcatgctgatgccggaagacaaaattcgcaaagtgctgaaa
atcgccaaagagcctatctccatggaaacgccaatcggcgacgatgaagattcgcatctg
ggggatttcatcgaggataccaccctcgagctgccgctggactccgcgaccaccgaaagc
ctgcgtgcggcgacgcacgacgtgctggccggtctcaccgcgcgtgaagcgaaagtgctg
cgtatgcgtttcggtatcgacatgaacaccgaccatacgctggaagaagtgggtaaacag
ttcgacgtgacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaagctgcgc
catccgagccgctctgaagtgctgcgcagcttcctggacgattaa

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