Corynebacterium ulcerans 131002: CUL131002_0602
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Entry
CUL131002_0602 CDS
T03899
Symbol
uvrD3
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuj
Corynebacterium ulcerans 131002
Pathway
cuj03420
Nucleotide excision repair
cuj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUL131002_0602 (uvrD3)
03430 Mismatch repair
CUL131002_0602 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuj03400
]
CUL131002_0602 (uvrD3)
Enzymes [BR:
cuj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUL131002_0602 (uvrD3)
DNA repair and recombination proteins [BR:
cuj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUL131002_0602 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
CUL131002_0602 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
ADDB_N
DUF5678
Rng_hyd_C
AAA_11
C1_1
Motif
Other DBs
NCBI-ProteinID:
AKA96150
LinkDB
All DBs
Position
614379..616430
Genome browser
AA seq
683 aa
AA seq
DB search
MIDLNDLDSDQRAAASAPRGPVAILAGAGTGKTRTITYRIANLIDRGMASPNRVLAVTFT
RRAAGEMRHRLGVMGVGGVQAQTFHSAAMRQLSYFWPQVAGNLPWKLLDNKFPLVGKAAR
SVGIETTTENVRDLLGEIEWAKATLITPDRYVAHVKDRKIPAAADKIAEVYRRYEQAKTT
SEGMLLDFDDLLLHTAGAIENSTAIAEEFREQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DITVVGDANQTIYSFTGATPNYLLGFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGKAR
GRVAGTRLTLEGMRPPGPEPEFCTFDDEPAEARAVASRIKELLNKGVAASEIAVLYRINA
QSAAFEQALADAGIVYQVRGGGEFFQRAEIRQAMSQLVRVAQRAGTESIHGSALETLVRS
ALAPLGLTPEEPEGTQARERWQSLEALAELTVELTRATPDLDIQGLLEQLNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPITHAIKGGDSHIEEERRLFYVGVTRARE
HLVCSWAKARQEGGRATRKRSRFFDGIVEEPIDIAVPPRTKRSQRCRVCGSPLGSPSEIV
MRRCADCPSGVDEEVFETLKAWRLDMAKEGGVPAYIVFTDATLHAIAEACPTSTDDLLKI
SGIGQMKAEKYGSSLLETLAQFR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctcaacgatctggatagcgatcaaagggctgccgctagtgctcctcgcggg
ccggtagccattcttgcgggtgccggaacgggtaagactcgaacgattacctatcggatt
gccaaccttattgatcgtggcatggctagtcctaatcgcgtactggcggtgacgtttaca
cgtcgtgctgcaggggaaatgcggcaccggctgggcgtcatgggcgtaggaggcgtacag
gcgcagacgttccactcagctgcgatgcgccagttgtcgtacttttggccgcaagtggcc
gggaatctgccgtggaaattgctggataacaagtttccgcttgtcggcaaggctgcgcgt
tcagtgggcatagaaacgactacggaaaacgtgagggatcttctaggcgagatcgagtgg
gcaaaagctacgttgataacgcctgaccgctatgtggcgcacgtaaaggaccgtaagatt
cccgcagccgcagataaaatcgccgaggtataccgcagatatgagcaggctaaaacaacg
agtgagggcatgctcctagacttcgatgatctgttattgcatacggcaggagccattgag
aattcgactgcgattgcagaggagtttcgggagcagtaccgcacttttgtggtcgacgaa
tatcaggacgttacgccgctgcagcaacgagtgcttgacgcatggttgggggagcgcgat
gacatcaccgtggtgggagacgctaaccagactatttactcttttacgggagcgactccc
aattatcttttggggttttcgcgtaagtatcctcacgcgacggtggtcaagctacagcga
gattataggtcgaccccccaagtgacagaccttgccaatacggtgattgggaaagcgcgg
ggtcgggtggcgggcacgcgattgactttggaaggaatgcgcccgcctggcccggaacca
gaattttgcactttcgacgatgaacccgctgaggcacgcgccgtagcgagcaggattaaa
gagctcctgaacaagggagtcgcagcgtccgaaatcgcagtgctttatcgaattaatgcg
cagtcagcggcttttgaacaagccctcgcggatgccgggattgtgtaccaggtgcgcggt
ggtggtgagttcttccagcgcgcggagattcgtcaagcaatgtctcagctggttcgcgtc
gcacagcgcgcaggaacagagtcgattcatggttccgccctggaaaccttggtgcgttcg
gcgttagcgcctctgggattaaccccggaagagccggaaggtactcaggcccgtgaacga
tggcagtctctagaagcccttgctgagctcacagtggagttgactcgagctacgccggat
ctggatatccaggggcttctagaacaactcaatcagcgagcaagcgcaaaacaccctccg
acgatgcaaggagtgacgttagcgtctttacatgcagctaaaggcctggagtgggacgcg
gtgttccttgtagggcttgtcgacggcaccctcccaatcactcacgccattaagggggga
gactcgcacattgaagaggagcgcaggcttttctatgtcggcgttactcgtgccagggag
caccttgtgtgctcgtgggcaaaagctcgtcaggagggcggacgcgcgacacggaagaga
agccgattctttgacgggatagtggaagagcctatcgacatcgccgtcccgccacgtacc
aagcgctcacaacgctgtcgcgtgtgcggctctccgttgggttccccatcagaaatcgtg
atgagaagatgcgccgattgcccgtcaggagttgacgaggaggtgtttgagacgctgaaa
gcgtggcgccttgacatggccaaagaaggcggtgtccctgcttacatagtcttcacagac
gcaaccctgcacgccattgcagaggcctgcccaacgagcacagatgacctactaaaaatt
tccggtatcggtcagatgaaagcggagaagtacggcagtagtttgctggaaactttggct
caattccgctga
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