Corynebacterium ulcerans 131002: CUL131002_0904
Help
Entry
CUL131002_0904 CDS
T03899
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cuj
Corynebacterium ulcerans 131002
Pathway
cuj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUL131002_0904 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuj03021
]
CUL131002_0904 (rho)
03019 Messenger RNA biogenesis [BR:
cuj03019
]
CUL131002_0904 (rho)
Transcription machinery [BR:
cuj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CUL131002_0904 (rho)
Messenger RNA biogenesis [BR:
cuj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CUL131002_0904 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKA96444
LinkDB
All DBs
Position
937869..940268
Genome browser
AA seq
799 aa
AA seq
DB search
MLSSRFRSSPPNCCQGRAGGAMLPRMCAFLTHSVGILGHLRHQYLNPVNSTACFPVVVTW
LNIFPVTYFSAGKGDERTSVTTTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLI
AAISGAQGGKAAQGGRSTASAAKHTTETKTAPKAKKDSAPAENSAAEASNAQQEKADQAP
AKEPKARRRRVLKTTGTTEATNDAVSNESIAQASAPVEEEKPRRRRATRRVETPSEKHGS
AESSSQDKAGMSADVNDGAAGSVEHGDADDENRYESRSAARRARRNRARREHREDRQVSQ
REDNRSENDQASHDGERRKDAPVDSTKAEERREAPEHQATDQQQTRESREGSENEHPRQR
NGRHHERGERGDRGDRNDRNRRNRRNRRGRDRDDNRDNTNIEPREDEVLQNIAGILDIVD
SNVAFVRTSGYHAGPADVYVNNQMIRRLGLRAGDAIVGQVRMNGDNSHGGHHGHNRGRNR
QKYNPLVRVESVNGMSIEEAKARPDFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGK
GQRALIVSPPKAGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIAS
TFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVD
SNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIS
ERRVFPAVDVNPSGTRKDELLLVPEEARIMHKLRRILAALDNQQAIDLLIKQLKKTKSNG
EFLMQIASSAPMAADAEEE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
gtgctcagttcccgctttagaagttcaccaccgaattgctgccaaggccgcgccggcggg
gcaatgcttcctcgtatgtgtgcgttcttaacgcattcggtagggattctcgggcatcta
cgccatcagtacctgaatccagttaattccacagcatgctttccagtggtggttacttgg
ttgaacattttcccggtgacttatttttccgctggtaaaggcgatgaaaggacatctgtg
acaacaacagataacggcgcacagcgtaatcttgctgcattgcgtctgcccgagctgcgc
aagatcgccgctgaaatgggcctgaaaggcacctctgcactacgcaaaggtgatctcatt
gccgcgattagtggcgcgcaggggggaaaggctgcacaaggcggacgtagtaccgcatct
gcagcaaagcacacgacggaaacaaaaactgcgccaaaggcaaagaaggattctgcgcct
gcagaaaactcagccgcagaggcttctaatgcccaacaagaaaaggctgatcaggctccg
gctaaagagccaaaggcacgtcgtcgtcgagttctgaagacaacgggaaccaccgaggca
acaaatgacgcggtttccaatgagtccattgcgcaggcgtctgcgcccgtggaagaagaa
aagccgcgccgtcgtcgcgcgactcgtcgtgtagaaactccttcagagaagcacggctct
gcagaaagctcctcacaggacaaagcgggcatgtccgctgacgtgaacgatggggcagcg
ggatccgtggaacatggcgatgctgatgatgaaaaccgctacgaatcgcgctcggctgct
cgacgcgctcgtcgtaaccgtgctcgacgggagcaccgcgaggaccggcaggtttctcag
cgagaagataatcgctctgagaatgatcaggcttcccacgatggggaacgacgtaaagac
gcacctgttgatagcacgaaagcagaggaacgtcgggaagctcctgagcatcaagctaca
gatcagcagcagactcgggaatcccgtgaaggttctgaaaacgagcatcctcgtcagcgc
aatggccgccatcatgagcggggcgagcgcggtgaccgaggcgatcgtaatgatcgtaat
cgccgtaatcgccgtaaccgacgtggtcgtgatcgcgacgataaccgggataacaccaac
attgagcctcgtgaagacgaagttttgcagaacatcgccggcatcctcgacatcgtggat
agcaatgtcgcttttgttcgcacgtcgggctaccacgctggtcccgcagacgtctatgta
aataaccagatgattcgtcgcttgggcctacgtgccggcgatgccatcgttggccaggtc
cggatgaatggcgataatagccatggcggacatcatggacacaaccgtggacgcaaccgt
caaaagtacaatccgctggttcgcgttgaatctgtcaacggcatgtccatagaggaagct
aaggcccgtccggacttctctaagctcactccgctgtacccgaaccagcgactgcgtttg
gaaaccgaaccaaagatccttaccactcgtgtgatcgacttgatcatgcctattggtaaa
ggtcagcgtgcgcttatcgtgtctccgccgaaagctggtaagacgacgattttgcagaac
attgctaacgccattgctaccaataaccctgagtgctacttgatggtagtgcttgtcgac
gagcgccccgaggaagtcaccgacatgcagcgctccgtcaagggcgaggttattgcctcc
accttcgatcgtccgccaagcgagcataccgctgtagctgagttggcaatcgagcgtgct
aagcgactcgttgaacagggacaagacgttgtggtgcttctagactccatcacacgcctt
ggtcgtgcttacaacaactcttctcctgcttcaggccgtatcctgtccggtggtgtggac
tcgaatgccctctacccgccaaagcgtttcctaggcgcagctcgtaacatcgaaaatggt
ggctcgttgactattatcgccactgcgatggtagaaactggctctgcaggcgacaccgtg
atcttcgaggaattcaagggaaccggtaacgcagaactcaagctggatcgcaagatctcc
gagcgtcgcgtattcccggcagtggacgttaacccgtcaggaactcgtaaagatgagctt
cttctggttcctgaggaagcccgcattatgcacaaactacgcaggattcttgcagccttg
gacaatcagcaggccatcgatctgctgatcaagcagctcaagaagactaaatccaacggt
gagttcttgatgcagattgcatcgagtgctccgatggctgcagacgcggaggaggagtaa
DBGET
integrated database retrieval system
