Corynebacterium ulcerans 131002: CUL131002_1366c
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Entry
CUL131002_1366c CDS
T03899
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cuj
Corynebacterium ulcerans 131002
Pathway
cuj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUL131002_1366c (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuj03019
]
CUL131002_1366c (pnp)
03016 Transfer RNA biogenesis [BR:
cuj03016
]
CUL131002_1366c (pnp)
Enzymes [BR:
cuj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CUL131002_1366c (pnp)
Messenger RNA biogenesis [BR:
cuj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CUL131002_1366c (pnp)
Transfer RNA biogenesis [BR:
cuj03016
]
Prokaryotic type
tRNA degradation factors
CUL131002_1366c (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
RNase_PH_C
KH_KhpA-B
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
AKA96891
LinkDB
All DBs
Position
complement(1458573..1460876)
Genome browser
AA seq
767 aa
AA seq
DB search
MTVVRRNIHEETCTLSKAKNIEFNVDEEFGITEAIATIDNGDFGTRTIRFETGQLAKQAD
GSVTTYLDDETMLLATTTASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTE
AILACRLIDRPLRPTFVKGLRNEVQVVITVLSMNPEDYYDVVAINGASAATQLSGLPVSG
AVGGVRMALIADDEHPKGQWIAFPTHEQHEKALFELVVAGRLVAKKQGRKTVEDVAIMMV
EAGATENVVEKIKDGAPAPTEEIVAQGLEAAKPFIEVLCRAQAGLAERAAKETQEFPLFP
PYSDVIYDAVEKKVSKKLRQLLTIKSKQERDDATNDYMESIEGELLAKFGSEDEAAASKA
IRAAYNAVMKKLVRHMILTEHFRIDGRGVTDIRDLGVEVELIPRAHGSALFERGETQILG
VTTLDMLKMEQQIDSLSPTSSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALM
PVIPSREEFPYTIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDE
VDGETRYVALTDILGAEDAFGDMDFKVAGTRDFVTALQLDTKLDGIPSKVLASALAQAYE
AREAILDTMAEVIESPDAMSDYAPRITTVTVPVSKIGEVIGPKGKTINSITEETGANISI
EEDGTVYVSATSGAAAEAAIEKINAIANPQLPKVGERFLGTIVKTTAFGAFVSLVPGRDG
LIHISKLGNGKRIEKVEDVVNVGDKVEVEILDIDNRGKISLAPVKED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgtgagaaggaatatccacgaggagacctgcactttgagcaaggcaaaaaac
atcgaattcaacgtagacgaagaattcggtattaccgaagcgatcgccaccattgacaac
ggcgacttcggaacccgtaccattcgctttgaaaccggccagctggccaagcaagccgat
ggctctgtcaccacttacctggatgatgagacaatgctgttggctaccacgacggcttcc
aaccagccgcgtgagggattcgacttcttcccactaacggtggacgtcgaggagcgcatg
tacgcagcgggccgcattccgggttcgtttttccgtcgtgagggacgcccctccactgaa
gcaatcttggcttgccgcctgatcgaccgcccactacgtccgacttttgttaagggactg
cgcaacgaggttcaggtcgttatcaccgttctgtccatgaacccagaagactactatgac
gttgttgcgatcaacggtgcgtcagctgctactcagctttccggtcttccggtatcgggt
gctgtgggcggagttcgcatggctcttatcgcggatgatgagcatcccaagggtcagtgg
attgcattcccaactcatgaacagcatgagaaggctctttttgaacttgttgttgcagga
cgcctggtagctaagaaacaggggcgcaagactgtcgaagacgttgccatcatgatggtg
gaagcgggtgcgactgagaacgtcgtagaaaagatcaaggatggcgctcctgcgccgaca
gaagagatcgttgcacaaggtctagaagcggctaagcctttcatcgaggttttgtgccga
gcacaggctggcctggcagagcgtgcagctaaagaaactcaagaattcccacttttccca
ccttattcggacgttatttacgatgccgtggaaaagaaggtttctaagaaactacgtcag
ctgttgaccattaagtcaaagcaagagcgtgacgacgccacgaacgactacatggaatcg
atcgagggtgagctgctcgcaaaattcggttctgaggatgaggctgcagcatcgaaggct
atccgcgctgcctacaacgccgtgatgaagaagctcgtgcgccacatgattctcaccgag
cacttccgcattgatggccgtggagtcaccgatattcgtgaccttggggtagaggtagag
ctcattcctcgtgcacacggttccgctctattcgagcgcggtgagacgcaaatcttgggt
gtcaccacgctagacatgctcaagatggagcagcagattgattcgttgtcgcctacatcg
tccaagcgctacatccaccactacaacttcccgccgtattccaccggagaaactggccgt
gtggggtccccgaagcgccgcgagatcggacatggagcgcttgcagagcgcgcccttatg
ccggtgattccttcccgtgaggagttcccttacaccatccgtcaggtttcggaagccctc
ggatctaacggttctacctccatggggtcagtgtgtgcctcaacgctctcgctgtacaac
gcgggtgttccgctgaaggcccccgtggctggcattgctatgggtctggtatctgatgaa
gttgacggagaaacccgttatgttgctttgacagacatccttggtgccgaggatgctttc
ggtgacatggacttcaaggttgctggaactcgtgactttgtcacagccctccagctggac
accaagcttgatggtattccttccaaggttctcgcgtctgcgcttgctcaggcttatgag
gctcgcgaagcaattctggatactatggctgaggttattgagagtccagatgcgatgagc
gattatgcgccgcgcattacgactgtcaccgttccagttagcaagatcggtgaggttatc
gggcctaagggcaagacgatcaactcgatcactgaggagaccggggcaaacatctccatc
gaggaagacggaactgtgtatgtttccgcgacttcaggtgctgccgctgaagcagcgatc
gaaaagatcaatgctattgctaatccacagttgcccaaggttggcgagaggttcctcgga
accatcgttaagaccactgcttttggtgcatttgtttctcttgtacctggtcgtgacggc
ctcattcacatctctaagctcggcaacggtaagcgcatagagaaggtagaagacgtagtc
aacgttggtgacaaagtcgaggtggagatcctcgacatagacaaccgcggcaagatttcc
ttggcgccagtgaaggaagactag
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