Cupriavidus sp. KK10: KB879_00205
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Entry
KB879_00205 CDS
T08941
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cuk
Cupriavidus sp. KK10
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuk03009
]
KB879_00205 (dbpA)
Enzymes [BR:
cuk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KB879_00205 (dbpA)
Ribosome biogenesis [BR:
cuk03009
]
Prokaryotic type
rRNA helicases
KB879_00205 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
CMS1
ERCC3_RAD25_C
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
QUN28439
LinkDB
All DBs
Position
46156..47565
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AA seq
469 aa
AA seq
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MNSTPAQPQAGTAFSTLPLSPTMLATLAQLGYDEMTPIQAASLPITLAGQDLVAQAKTGS
GKTAAFGLALLHRLDPRRFDVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGSP
MRPQVDSLIHGAHIVVGTPGRILDHIDRGSLDLSGINTLVLDEADRMLDMGFFDDIAYVA
SRCPKDRQTLLFSATYPPGIDKLSHRFLRNPQSVKLEATHDNSTIRQRFYEVEEGERLNA
VGRLLDHFRPVSTLAFCNTKARCRELVELLRAQGYQALALHGELEQRERDQVLVQFANRS
CSVLVATDVAARGLDIAQLEAVINVEITPDPEVHVHRIGRTGRADQEGWAFSLVSMDEMG
RVGNLEQHHGGEFEWHPLADLRPASNERLLPPMVTLQMLGGRKEKIRPGDILGALTGDAG
FTKEQIGKINVLEMSTYIAVERSIGREAVKRLNAGKVKGKKVKVRMLTE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgacccccgcccagccgcaagccggcaccgctttttccaccctgccgctgtcg
cccaccatgctcgccacgctggcgcagcttggctatgacgaaatgacgccgattcaggcg
gccagcctgccgatcacattggcgggccaggacctggtggcgcaggcgaagaccggcagc
ggcaagaccgccgccttcgggctggcgctgctgcaccggctcgatccgcgccgcttcgac
gtacaggcgatggtgctttgccccacgcgcgaactggccgaccaggtcacgcaggaaatc
cgccgcctggcgcgcgccgaagagaacatcaaggtgctgacgctgtgcggcggctcgccg
atgcgcccgcaggtcgacagcctgattcatggggcacatatcgtggtgggcacgcccgga
cgcatcctggatcacatcgaccgcggcagcctggacctgtccggcatcaacacgctggtg
ctggacgaggccgaccgcatgctcgacatgggcttcttcgacgacatcgcctatgtggcc
agccgttgcccgaaggaccggcagacgctgctgttctctgccacgtatccgcccggcatc
gacaagctcagccaccgcttcctgcgcaacccgcagtcggtcaagctggaggctacgcat
gacaacagcaccatccgccagcgcttctatgaagtcgaggaaggcgagcgcctgaacgca
gtggggcgcctgctggaccacttccggccggtcagcacgctggcgttctgcaataccaag
gcgcgctgccgggagctggtggaactgctgcgcgcgcagggctaccaggcgctggcgctg
cacggcgagctggagcagcgcgagcgcgaccaggtgctggtgcagtttgccaaccgcagc
tgctcggtgctggtggccaccgacgtggccgcgcgcgggctggatatcgcgcagctcgag
gcggtgatcaatgtcgagatcacgcccgatcctgaagtccacgtgcaccgcatcggccgc
actggccgcgccgaccaggaaggctgggccttcagcctggtcagcatggacgagatgggc
cgcgtgggcaatctggagcagcaccacggcggcgaattcgaatggcacccgctggccgac
ctgaggcccgccagcaacgaacgcctgctgccgccgatggtgaccttgcagatgctgggc
ggccgcaaggagaagatccgccccggcgatatcctgggcgcgctgaccggtgatgccggc
ttcaccaaggagcagatcggcaagatcaatgtgctggagatgtcgacctatatcgcggtg
gagcgcagcatcgggcgcgaggcggtgaagcggctcaatgccggcaaggtcaagggcaag
aaggtgaaggtgcggatgctgacggagtga
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