Cupriavidus sp. KK10: KB879_01885
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Entry
KB879_01885 CDS
T08941
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03420
Nucleotide excision repair
cuk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KB879_01885
03430 Mismatch repair
KB879_01885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_01885
Enzymes [BR:
cuk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KB879_01885
DNA repair and recombination proteins [BR:
cuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KB879_01885
MMR (mismatch excision repair)
Other MMR factors
KB879_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
RecR_HhH
AAA_11
AAA_12
HHH_5
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
QUN28749
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All DBs
Position
complement(366200..368299)
Genome browser
AA seq
699 aa
AA seq
DB search
MTLDLAPAADLAAPDADDVPAYLSRLNPEQRAAVEHGSDAPLLIIAGAGSGKTNTLAHRV
AHLVLAGADPRRILLLTFSRRAAAEMGRRVERIVDQALGTQTGAGRAALQWSGTFHAIGA
RLLREYAETLGLSPAFTISDRGDAADLMHVVRHDLGLSETASRFPKKETCLSIYSRVVNT
QALLEDVLRQQFPRYAMWADALRTLFAGYVEAKQKQHVLDYDDLLLYWAQAMAEPTIAQD
MGARFDHVLVDEYQDTNALQASILLAMRPDGRGLTVVGDDAQSIYAFRGATVRNILDFPA
QFTPAAQQVTLSQNYRSTQPILQAANAVIGLAAERYTKDLWSERASAEKPGVIVVNDEAD
QARYVVEQVLARREAGLTLMAQAVLFRAADHSAQVEIELARRNIPFVKFGGLKFLESTHV
KDVLAVVRWLENPRDRMAGFRTLQLLPGIGPKTAARVLDAMALATEPLFSLEEFEPPPAA
APAWADLLALARALMAPTSPWPSEFEQVLAWYAPHLERLHDDAAARQADLQQLERIAATY
GARERFLTELTLDPPSASSDESGVPSRDEDYLILSTIHSAKGQEWKAVYVLNAVDGCMPS
DLATGTTEEIEEERRLLYVAMTRAKDHLDIVVPQRFYVHQQVGFGDRHVYASRTRFLPNR
VMPNFHSRAWPPPPMPGAAPTRPALAPVDLASRMRNMWR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgactttggacctagcccccgccgccgacctcgcggcccctgacgccgatgacgtcccc
gcctacctgtcccggctcaacccggagcagcgcgccgcggtggaacacggcagcgacgcg
ccgctgctgatcatcgccggcgccggctcgggcaagaccaatacgctggcgcaccgggtc
gcgcacctggtgctggccggtgccgatccgcgccgcatcctgctgctgacgttctcgcgc
cgcgccgcggccgagatgggacggcgcgtcgagcgcatcgtcgaccaggcactcggcacc
cagaccggcgcggggcgcgcggcgctgcaatggtccggcaccttccacgccatcggcgcg
cgcctgctgcgcgaatacgccgagaccctgggcctgtcgcccgccttcaccatcagcgac
cgcggcgatgccgccgacctgatgcacgtggtgcgccacgacctggggctgtcagagacc
gccagccgcttcccgaagaaggaaacctgcctgtcgatctactcgcgcgtggtcaacacc
caggcgctgctggaagacgtgctcaggcagcagttcccgcgctacgcgatgtgggccgat
gcgctgcgcaccctgttcgccggctatgtcgaggccaagcagaagcagcatgtgctggac
tatgacgacctgctgctgtactgggcgcaggccatggccgagcccaccatcgcgcaggac
atgggcgcgcgcttcgaccatgtgctggtcgacgaataccaggacaccaatgcgctgcag
gcgtcgatcctgctggccatgcgaccggacggccgcggcctgaccgtggtgggcgacgac
gcgcagtcgatctacgccttccgcggcgctaccgtgcgcaatatcctggacttcccggcg
caattcacgccggccgcgcagcaggtcacgctgtcgcaaaactaccgctcgacgcagccg
atcctgcaggccgccaacgccgtgatcgggctggcggccgagcgctataccaaggacctg
tggtccgagcgcgcctcggccgaaaagcccggcgtgatcgtggtcaacgatgaggccgac
caggcccgctacgtggtcgagcaggtgctggcgcggcgcgaggccggcctgacgctgatg
gcgcaggcggtgctgttccgcgccgccgaccacagtgcgcaggtggagatcgagctggcc
cggcgcaatatcccgttcgtgaagttcggcggactgaaattcctggagtcgacccacgtc
aaggacgtgctggcggtggtgcgctggctggaaaacccgcgcgaccgcatggcgggcttc
cgcacgctgcagctgctgcccggcatcggccccaaaaccgcggcgcgcgtgctggatgcg
atggcgctggccaccgagcccttgttctcgctggaggaattcgagccgccgccggccgcc
gcgcccgcctgggccgacctgctggcgctggcgcgcgcgctgatggcgcccacctcgccg
tggccgtcggagttcgagcaagtgctggcttggtacgcgccgcacctggagcgcctgcac
gacgatgccgccgcgcgccaggccgacctgcagcagctggagcgcatcgccgccacctac
ggcgcgcgcgagcgcttcctgaccgagctgacgctggacccgcccagcgcctccagcgac
gaatccggcgtgccctcgcgcgacgaggactacctgatcctgtcgaccatccactcggcc
aagggccaggagtggaaggcggtatacgtgctcaatgcggtcgacggctgcatgccgagc
gacctggcgaccggcaccaccgaagagatcgaggaagaacggcggctgctctatgtggcg
atgacgcgggccaaggaccacctggacatcgtggtgccgcagcgcttctatgtgcatcag
caggtaggcttcggcgaccggcatgtgtatgcgtcgcgcacgcgcttcctgccgaatcgc
gtgatgcccaacttccacagccgtgcctggccgccgccgccgatgccgggcgcggcgccg
acaaggccggcgctggcaccggtggacctggccagccggatgcggaatatgtggcgctga
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