Cupriavidus sp. KK10: KB879_04440
Help
Entry
KB879_04440 CDS
T08941
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03030
DNA replication
cuk03430
Mismatch repair
cuk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KB879_04440 (dnaE)
03430 Mismatch repair
KB879_04440 (dnaE)
03440 Homologous recombination
KB879_04440 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuk03032
]
KB879_04440 (dnaE)
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_04440 (dnaE)
Enzymes [BR:
cuk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KB879_04440 (dnaE)
DNA replication proteins [BR:
cuk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KB879_04440 (dnaE)
DNA repair and recombination proteins [BR:
cuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KB879_04440 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QUN29216
LinkDB
All DBs
Position
903788..907300
Genome browser
AA seq
1170 aa
AA seq
DB search
MSAPRFVHLRLHSEYSIVDGIVRLEDAVKAAAADGMGALALTDLANAFGLIRYYKEARGG
GVKPVVGADVWLTNAEDRDKPSRLLLLVQDRRGYLNLCMLLSRAWLGNQHRGRAEIDPAW
FLEPGEDDLPLATGLIALSGAMGGDIGMALANGNADGARRAAQHWSTVFAQRFYIELQRA
GNAGTDAYVQQAVQLAAELQLPVVATHPVQFMTPDDYTAHEARVCIAEGELLANPRRTRR
FTTDQYFKTQDEMCALFADIPSALENAVEIARRCNLTLELGKPRLPLFPTPDGMSLDDYL
VFMAKDGLEKRLAVLFPDEAVRESKRPEYYARLEFETGTIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQHGRD
RVITYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYGFVDGIAKLIPFKPGKLVT
IEEAKKEEPLLTERENNEEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGRLTDFCPLYT
QGAQNDGMSGVVSQYDKDDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWNCSH
IPLDDSPAFDILKTANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPS
FCARKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKK
KPEEMAQHRVMFREGADKNGLSAQQADDIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLK
AHHPAEFMAANMSLAMDDTDKVKILYEDCKLNKLAVLPPDVNASEYRFAPTDSKTIRYGL
GGIKGSGQGAIEDILRAREERPFTDLFDFCERVDRRQVNRRTMEALIRAGAFDSLNDNRA
QLLASVPIAMEAAEQKAESANQVSLFDLMGDAGEAHRPELLDEPRWSPKRTLQEEKQALG
YYFSGHLFDAYRDEVRRFNKGTLAALEKEVQGNGGGFGRDVRGKTIAGVISGVRTQMTQR
GKMLIVTLDDGTGLVEMTVFNELFDANRHMFREDELLIATGNARHDTFTGGVRFTAESVM
DLVAARLKFASAVRLAMNGNSSTGMLRELLMPHLARASGGQGLPVRIHYQSAAASCEAML
GADWKVVPSDEALTALRLALSPDSVSTLYE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccccgcttcgtacacctccgcctgcattccgaatattccatcgtggacggc
atcgtccgcctggaagacgccgtcaaggccgccgccgccgatggcatgggcgcgctcgcc
ctgacggaccttgccaacgccttcgggctgatccgttactacaaggaggcgcgcggcggc
ggcgtgaagcccgtggtcggtgccgacgtctggctcaccaacgccgaggaccgcgacaag
ccgtcgcgcctgctgctgctggtgcaggaccgccgcggctacctgaacctgtgcatgctg
ctgtcgcgcgcgtggctgggcaaccagcaccgcgggcgcgccgagatcgatccggcctgg
ttcctggaacccggcgaggacgacctgccgctggccactggcctgatcgccctgtcgggc
gcaatgggtggcgatatcggcatggcgctggccaacggcaatgccgacggtgcgcgccgc
gcggcacagcattggtccacggtattcgcgcagcgcttctacatcgaactgcagcgtgcc
ggcaatgccggcaccgatgcctacgtgcagcaggccgtgcagctggcggctgaactgcaa
ctgccggtggtggccacgcatccggtgcagttcatgacgccggacgactacaccgcgcac
gaggcgcgcgtgtgcatcgccgagggcgagctgctggccaatccgcgccgcacccggcgc
tttaccaccgaccagtacttcaagacccaggacgagatgtgcgcgctgttcgcggacatc
ccctcggcactggagaacgcggtcgagatcgcgcgccgctgcaacctgacgctggagctg
ggcaagccgcgcctgccgctgttcccgacgcccgacggcatgtcgctggacgactacctg
gtcttcatggccaaggacgggctggagaagcgcctggcagtgctgttccccgacgaggcg
gtgcgcgaatcgaagcgcccggaatactacgcacggctggagttcgagaccggcaccatc
atcaagatgggcttccccggctacttcctgatcgtggcggactttatcaactgggccaag
aacaacggcgtgccggtgggtccgggccgcggttcgggcgccggttcgctggtcgcgtat
gcgctcggcatcaccgacctggatccgctcaagtacgcgctgctgttcgagcgattcctg
aacccagaacgggtgtcgatgcctgacttcgacatcgacttctgccagcacggccgcgat
cgcgtgatcacctacgtgaaggagaagtacggcaaggacgcggtatcgcagatcgccacc
ttcggcaccatggcggccaaggccgcggtgcgcgacgtgggccgcgtgctcgacctcggc
tacggctttgtcgacggcatcgccaagctgatcccgttcaagccgggcaagctggtcacc
atcgaggaggccaagaaggaagagccactgctgaccgagcgcgagaataacgaggaagaa
gtgcgccagttgctggaactggcgcagcgcgtggaaggcatgacgcgtaacgtcggcatg
cacgccggcggcgtgctgatcgcgcccggcaggctgaccgacttctgcccgctgtacacg
cagggcgcgcagaacgacggcatgagcggcgtggtcagccagtacgacaaggacgacgtc
gaggccgccggcttggtgaagttcgactttctgggcctgaccacgctgaccatcctggac
tgggccgagcgctatatccgccgcctcgatccgagcaaggccgactggaactgcagccat
atcccgctcgacgacagtcccgccttcgatatcctgaagactgccaacaccgtcgccgtg
ttccagctggaaagccgcggcatgcagggcatgctcaaggacgccaagcctgaccgcttt
gaggacatcatcgcgctggtggcactgtaccgcccgggcccgatggacctgatccccagc
ttctgcgcgcgcaagcacggccgcgagaaggtggagtatcccgatccgcgcgtcgaaccc
gtcctgaaagagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcag
atcatcggcggctactcgctcggcggcgccgacctgctgcgccgcgccatgggcaagaag
aagcccgaggaaatggcgcagcaccgcgtgatgttccgcgaaggtgccgacaagaatggt
ctctccgcgcagcaggccgacgatatcttcgacttgatggagaagttcgcgggctacggc
ttcaacaagtcgcacgcggccgcgtacgcactgctggcgtactacaccgcctggctcaag
gcccaccatccggccgaattcatggcagccaacatgtcgctggccatggatgacaccgac
aaggtcaagatcctctacgaggactgcaagctcaacaagctcgcggtgctgccgcccgac
gtcaacgccagcgaataccgcttcgcgccgaccgactccaagaccatccgctatggcctg
ggtggcatcaagggcagcggccagggcgcgatcgaagacatcctgcgcgcgcgcgaggaa
cggcccttcaccgatctgttcgacttctgcgagcgcgtcgaccgccgccaggtcaaccgc
cgcaccatggaggccctgatccgcgccggcgctttcgacagcctgaacgacaaccgcgca
cagctgctggcatcggtgccgatcgcgatggaggccgccgagcagaaggcggagtccgcc
aaccaggtgtcgctgttcgacctgatgggcgatgccggcgaagcgcaccgcccagagttg
ctggacgagccgcgctggagcccgaagcgcacgctgcaggaagagaagcaggcgcttggc
tactacttctcaggccatctgttcgatgcctatcgcgacgaggtgcgccgcttcaacaag
ggcacgctggccgcgctggaaaaggaagtgcagggcaacggcggcggcttcggccgcgat
gtgcgcggcaagaccatcgccggcgtgatctccggcgtccgcacgcagatgacccagcgc
ggcaagatgctgatcgtgacgctcgacgacggcaccgggctggtcgagatgacggtgttc
aacgagctgttcgacgccaaccggcacatgttccgcgaggacgagctgctgattgccacg
gggaatgcgcggcacgatacgtttaccggtggggtgaggttcacggcggaatcggtgatg
gacctggtggccgcgcgcctcaagttcgccagcgcggtgcggctggcgatgaatggcaat
tcctcgaccgggatgctgcgcgaactgctgatgccgcacctggcccgcgccagcggcggg
cagggtttgccggtgcgcatccactaccagtcggcggcggcttcgtgcgaggccatgctc
ggagcggactggaaggtggtgccctccgacgaggcgctgaccgcgttgcggctggcactg
tcgccggacagcgtcagcaccctctacgaataa
DBGET
integrated database retrieval system
