KEGG   Cupriavidus sp. KK10: KB879_05730
Entry
KB879_05730       CDS       T08941                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
cuk  Cupriavidus sp. KK10
Pathway
cuk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cuk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KB879_05730 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cuk03400]
    KB879_05730 (uvrB)
DNA repair and recombination proteins [BR:cuk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KB879_05730 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KB879_05730 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 UB2H AAA_16 Kinesin P-loop_SecA FERM_M FlaG
Other DBs
NCBI-ProteinID: QUN29448
LinkDB
Position
1170846..1172930
AA seq 694 aa
MSNLAEAAPALDEDKFVTFPGSPFQLYQPFPPAGDQPEAIRQLVEGVDDGLSFQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPTEYHQMILTL
RAGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV
ESLHFFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEAIKSELRERLEFFHKENRLV
EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGARPGDPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKTTLVEYGFRLPSALDNRPLKFDEFERKMRQVMFVSATPAQFEQ
ENAGQVVEQVVRPTGLVDPIILVRPATTQVDDLVSEIHARVEAGERVLVTTLTKRMAEQL
TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTESMKKAIGETERRRAKQIAFNEAN
GITPRGVVKRIKDIIDGVYSVSDAKAELLAAQEQARYEDMSEKQVSKEIKRLEKLMLDHA
RNLEFEQAAQVRDQLAKLKAQVFGASGDGALPPA
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgtcgaaccttgccgaagccgcgccggccctggacgaagacaaattcgtcacatttccc
ggctccccgttccagctgtaccagccgttcccgcccgccggcgaccagccggaggccatc
cggcagctggtggagggcgtggacgacggcctgtcgttccagacgctgctgggcgtcacg
ggctcgggcaagaccttcaccatggccaacgtgattgcccgcatggggcggccggccatc
gtgtttgccccgaacaagacgctggcggcgcagctctatgcggaattccgtgaattcttc
ccgcgcaacgccgtcgagtacttcgtcagctactacgactactaccagcccgaggcctac
gtcccgcagcgcgacctgtttatcgagaaggactcgtcgatcaacgagcatatcgagcag
atgcggctgtctgcgaccaagagcctgctggagcgccgcgacaccatcatcgtggcaacc
gtctcggcgatctatggtatcggcaacccgaccgaataccaccagatgattctcaccttg
cgggccggcgacaagatcagccagcgcgacgtgatcgcgcgcctgatcgcgatgcagtac
acccgcaacgagaccgacttccagcgcggcaccttccgcgtgcgtggcgacaccatcgat
atcttcccggccgagcatgccgagatggcggtgcggctggagatgttcgatgacgaagtc
gagtcgctgcatttcttcgacccgctcacgggccgcgtgcgccagaagatcccgcgcttc
acggtctacccgtcgagccactatgtgaccccacgcgagaccgtgctgcgcgcgatcgag
gcgatcaagtcggagctgcgcgagcgcctcgagttcttccacaaggaaaaccggctggtg
gaggcgcagcggctggagcagcgcacccgcttcgacctggaaatgctgtccgagctgggc
ttctgcaagggcatcgagaactattcgcggcacctgtccggtgcacgccccggcgatccg
ccgccgacgctggtcgactacctgccgccggatgcgctgatgttcctggacgagtcgcac
gtgctgatcggccagctcaacggcatgtacaacggcgaccgcgcgcgcaagaccacgctg
gtggagtacggcttccggctcccgtcggcgctggacaaccggccgctgaagttcgacgaa
ttcgagcgcaagatgcgccaggtgatgtttgtctcggccacgccggcgcagttcgagcag
gagaatgccgggcaggtggtggagcaggtggtgcgtccgaccgggctggtcgatcccatc
atcctggtgcgcccggcgaccacgcaggtggacgacctagtgtccgagatccacgcccgc
gtcgaggccggcgaacgcgtgctggtgaccacgctgaccaagcgcatggccgagcagctg
actgagttcctgtccgagaacggggtcaaggtgcgctacctgcactcggacatcgacacc
gtcgagcgcgtggagatcatccgcgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgcgagggcctggatattcccgaggtgtcgctggtggcaatcctcgat
gcggacaaggaaggcttcctgcgcgccgagcgctcgctgatccagaccatcggccgcgcc
gcgcgcaacgtcaacggtaccgccatcctgtacgcggaccgcatgaccgagtcgatgaag
aaggccattggcgagaccgagcgccgccgcgccaagcagatcgccttcaacgaggccaac
ggcatcacgccgcgcggtgtggtcaagcgcatcaaggacatcatcgacggcgtctacagc
gtcagcgatgccaaggccgagctgctggcggcgcaggagcaggcccgctacgaggacatg
agcgagaagcaggtctccaaggaaatcaagcgcctggagaagcttatgcttgaccatgcc
cgcaacctggaattcgagcaggcggcgcaggtgcgcgaccagctggccaagctcaaggca
caggtgttcggcgccagcggagatggcgcgctgccgcccgcctga

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