Cupriavidus sp. KK10: KB879_05835
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Entry
KB879_05835 CDS
T08941
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03410
Base excision repair
cuk03430
Mismatch repair
cuk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KB879_05835 (recJ)
03430 Mismatch repair
KB879_05835 (recJ)
03440 Homologous recombination
KB879_05835 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_05835 (recJ)
DNA repair and recombination proteins [BR:
cuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KB879_05835 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KB879_05835 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KB879_05835 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QUN29469
LinkDB
All DBs
Position
complement(1189474..1191171)
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AA seq
565 aa
AA seq
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MTRIAIRQFSPEHASSLAAAGLHPTLARILAARGVARAAELATDLPELVPPAAMKGIGHA
AAYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGAQVEYIVPNRFEYGYGLTPEI
VALAARQQPDVIVTVDNGIASVDGVAAANALGIDVVVTDHHLPGSELPQAAVIVNPNQPG
CEFPSKNLAGVGVMFYVLLALRAELRQRGVYTQATQPPLQTLLDLVALGTVADVVKLDTN
NRILVAQGLRRMRAGRMQPGVAALFRAAGREAARANTFDLGFGLGPRLNAAGRLADMSLG
IECLLTEDANRAWEIAQELDGMNRERRDIEAGMQQEALQILEQPLAGPDPSARFTVSVFN
DTWHQGVIGIVASRLKDKFHRPTITFAPGDETTVKGSGRSIPGFHLRDALDLVSKRHPGM
LLKFGGHAMAAGLTVRAERFAEFQEAFEAVGREWLTDDQLARVIETDGDIEDQCFSPEFV
TLLEQQVWGQGFPAPTFCGEFDVLRQSVLKGKHLKLQLGRGSQRFDAIWFNHADSLGASA
QVAYRLDNNTFNGVTRVQLVIEHAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccggatcgccatccgccagttttcccccgaacacgccagctcgctggccgccgcc
ggcctccaccccacgctggcccgcatcctggccgcgcgcggcgtggcccgcgccgccgag
cttgccaccgacttgcccgaactggtgccgcccgcggccatgaagggcatcggccacgcc
gcggcctacctggctgacgccatcgccgccggcaagcgcctgctgatcgtcgctgactat
gactgcgacggcgccaccgcctgcgcggtgggcgtacgcgggctgcgcatgctgggcgca
caggtggagtacatcgtgccgaaccgcttcgagtacggctacggcctgaccccggagatc
gtggcactggcggccaggcagcagccggacgtgatcgtcacggtcgacaacggcatcgcc
agcgtcgacggcgtggccgcggccaatgcgctgggcatcgacgtggtggtgaccgaccac
cacctgcctggatctgagctgccgcaggccgcggtgatcgtcaacccgaaccagccgggc
tgcgaattccccagcaagaacctggcgggcgtgggtgtgatgttctatgtgctgctcgcg
ttgcgcgcggaactgcgccagcgcggcgtctatacccaggccacgcaaccgccgctgcag
acgctgctggacctggtggcgctgggcacggtggccgacgtggtcaagctggacaccaac
aaccgcatcctggtggcgcagggcctgcgccgcatgcgcgccggacggatgcagccgggc
gtggcggcgctgttccgtgccgccgggcgcgaggcggcgcgcgccaataccttcgacctg
ggcttcgggctgggtccgcgcctgaacgcggccggccggctggcggacatgtcgctgggc
attgaatgcctgttgaccgaagatgccaaccgcgcctgggaaatcgcccaggagctggac
ggtatgaaccgcgagcggcgcgacatcgaggccggcatgcagcaggaggcgctgcagatc
ctggagcagccgctggccggcccggatccgtcggcacgctttaccgtcagcgtgttcaac
gacacctggcaccagggcgtgatcggcatcgtggcgtcgcgtctgaaagacaagttccac
cgccccaccatcaccttcgcccccggcgacgagaccaccgtcaagggctcgggccgctcg
atccccggcttccacctgcgcgatgcgctggacctggtgtccaagcgccatcccggcatg
ctgctcaagttcggcggccacgccatggcggccgggctgaccgtgcgcgcagagcgcttt
gccgagttccaggaagccttcgaggcggtcggccgcgaatggctgaccgacgaccagctg
gcgcgcgtgatcgagaccgacggcgatatcgaggaccagtgcttcagcccggaattcgtc
accctgctggagcagcaggtatggggccagggcttcccggcgccgaccttctgcggcgag
ttcgacgtgctgcgccagagcgtgctcaagggcaagcacctgaagctgcagctggggcgc
ggcagccagcgctttgatgcgatctggttcaaccacgccgactcgctcggtgccagcgcg
caggtggcctaccggctcgacaacaacaccttcaacggcgtcacccgcgtgcaactggtg
atcgagcacgcgcagtag
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