Cupriavidus sp. KK10: KB879_06930
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Entry
KB879_06930 CDS
T08941
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
cuk
Cupriavidus sp. KK10
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuk03032
]
KB879_06930
03036 Chromosome and associated proteins [BR:
cuk03036
]
KB879_06930
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_06930
DNA replication proteins [BR:
cuk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KB879_06930
Chromosome and associated proteins [BR:
cuk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KB879_06930
DNA repair and recombination proteins [BR:
cuk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KB879_06930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
RAP-1
Motif
Other DBs
NCBI-ProteinID:
QUN29660
LinkDB
All DBs
Position
1403650..1404060
Genome browser
AA seq
136 aa
AA seq
DB search
MNDRDANSMTAAALGEMSDRQASSLDDAMPDNRATEVPTLTKAELAEMLFDQVGLNKRES
KDMVEAFFDVIREALEQGDSVKLSGFGNFQLRDKPQRPGRNPKTGEVIPITARRVVTFHA
SQKLKGLVEERAGIVG
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcgagacgcgaattccatgaccgctgcagcactgggtgagatgagcgaccgg
caggcttcctcccttgacgacgcgatgccggataaccgcgcgaccgaagttcccacgctg
accaaggccgaactcgccgagatgctgttcgaccaggtgggcctgaacaagcgtgaatcg
aaggacatggtcgaagccttcttcgacgtcatccgcgaagcgctggagcagggcgacagc
gtcaagctgtccggcttcggcaacttccagttgcgcgacaagccgcagcggcccggccgc
aatcccaagaccggcgaagtcattccaatcaccgcgcgccgcgtggtcacgttccacgcc
agccagaagctcaagggcctggtggaagaacgcgcaggcatcgtcggctga
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integrated database retrieval system
