Cupriavidus sp. KK10: KB879_11085
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Entry
KB879_11085 CDS
T08941
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KB879_11085
09124 Replication and repair
03420 Nucleotide excision repair
KB879_11085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuk03021
]
KB879_11085
03036 Chromosome and associated proteins [BR:
cuk03036
]
KB879_11085
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_11085
Enzymes [BR:
cuk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KB879_11085
Transcription machinery [BR:
cuk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KB879_11085
Chromosome and associated proteins [BR:
cuk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KB879_11085
DNA repair and recombination proteins [BR:
cuk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KB879_11085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
FJX1_middle
Motif
Other DBs
NCBI-ProteinID:
QUN30409
LinkDB
All DBs
Position
2300808..2303117
Genome browser
AA seq
769 aa
AA seq
DB search
MSAVPPPIPAPPATPAAPAYVVAVRALCEFTAKAGDLDLRFVPTPSSQEGVAGHAVVTSR
RVEGYQAEVALAADFGPLHVRGRADGYDPAANRLEEIKTVRGDAAVPDNHRHLHWAQAKV
YGCLLCRKLGLPGLEIAVVYFDIISQREHPVAEHFTAQALEAFFVQTCEQFLHWAQAELA
HRQARDGALAQLAFPHQGFRPGQRELAQAVYNANRAGRHLLAQAPTGIGKSVGTLFPVLK
AMPGQGIDKVYFLSARSTGRGVALHAANALRGHGAQPLHVLELVARDKACEHPELACHGE
SCPLARGFYDRLPAAREAARGVPVRDRAAVRTLALAHGICPYYLSQELVRWSDVVVADYN
YYFDRSALLYALTAANGWRASVLVDEAHNLVERGRAMYTAELDPQSLREVRRSAPAVVRK
PLTRLARQWSTLARQSDDAYEVLPEVPAALRRALDECCAAALTHMTEHPGAQDPALQRFY
FDALHFGRLAEQLDAHSLFDIQRVPRSGRGHHAWLCLRNVIPAPFLRPRFAAAHSVTLFS
ATLDPAAYYLDTLGLPADCARVQVPSPFRAEQLSVRIAARISTRYARREQSLPAIVALMA
GQFRARRGNYLAFFSSHEYLQQAVARFAQSHPDIPHWVQSRGMDEAAQAAFLDTFAEGGE
GIGFAVLGGAFAEGVDLPGERLIGAFVATLGLPQFNAVNEQFRARMQQVFGQGYAYAYLY
PGLRKVVQAAGRVIRTQQDQGVVYLIDDRFAAAEVRELLPAWWEIATAA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgccgtcccgccgcccattccagccccgcctgccacgccagccgctccggcctac
gtggtggccgtgcgcgcgctgtgcgagttcactgccaaggcgggtgacctggacctgcgc
ttcgtgccgacgccatcgtcgcaggagggcgtggccgggcatgccgtagtgaccagccgg
cgcgtggagggctaccaggccgaggtggcgcttgccgccgatttcggccccttgcatgtg
cgcggccgcgccgatggctacgatcccgccgccaaccggctggaagaaatcaagaccgtg
cgcggcgatgccgccgtgccggacaaccaccgccacctgcactgggcgcaggccaaggtc
tacggctgcctgttatgccgcaagctggggctgcccgggctggagatcgcggtggtctat
ttcgacatcatcagccagcgcgagcacccggtcgcggagcacttcactgcgcaggcgctt
gaagccttcttcgtgcagacctgcgagcagttcctgcactgggcgcaggcggaactggcc
catcggcaggcacgcgatggcgcgctggcgcagctggcctttccgcaccagggtttccgc
ccgggccagcgcgaactggcgcaggcggtctacaacgccaaccgcgcgggccgccacctg
ctggcgcaggcgcccaccggcatcggcaagtcggtcggcacgctgttcccggtgctcaag
gccatgccggggcagggcatcgacaaggtctacttcctgtcggcccgctccaccgggcgc
ggcgtggcgctgcacgccgccaatgcgctgcgcggccatggcgcgcagccgctgcatgtg
ctggagctggtggcccgcgacaaggcctgcgagcatccggagctggcctgccatggcgag
tcctgcccgctggcgcgcggcttctatgaccgcctgccggcagcacgcgaagccgcgcgc
ggcgtgccggtgcgcgaccgcgccgcagtgcgcacgctggcgttggcacacgggatctgc
ccttactatctgtcgcaggaactggtgcgctggagcgacgtggtggtggccgactacaac
tactacttcgaccgcagcgcgttgctgtacgcgctgaccgcggccaatggctggcgcgcc
agcgtgctggtggacgaggcccacaacctggtcgagcgcggccgcgccatgtacaccgcg
gaactcgacccccaatcgctgcgcgaggtgcgccgcagcgcgccggccgtcgtgcgcaag
ccattgacgcggctggcccgacaatggagcacgctggcgcgccagagtgatgacgcctac
gaagtcctgcccgaagtgcccgccgccttgcgccgcgcgctggacgaatgctgcgcggcg
gcactgacgcatatgaccgagcatccaggcgcgcaggatccggcgctgcagcgcttctat
ttcgatgcgctgcattttggccgcctggccgagcagctcgacgcgcattcgctgttcgat
atccagcgcgtgccgcgcagcggccgcggccaccatgcgtggctgtgcctgcgcaatgtc
atcccggccccgttcctgcgcccgcgctttgccgccgcgcattcggtcacgctgttctcc
gcgacgctcgatcctgccgcctattacctcgatacgctgggtttgcctgccgattgcgcg
cgggtgcaagtgccatcgccgttccgcgccgagcaactgtcggtgcggattgcagcgcgc
atctccacccgctatgcgcggcgcgaacaatcgctgccggccatcgtcgcgctgatggcc
ggccagttccgcgcgcggcgcggcaactacctggcgttcttcagcagccatgaatacctg
caacaagccgtggcccgcttcgctcagtctcaccccgacatcccgcattgggtgcagtcg
cggggcatggacgaagccgcgcaggcggcgttcctggatacgtttgcggaaggcggcgag
ggcatcggctttgcggtgctgggcggcgcctttgccgaaggcgtggacctgcccggcgag
cgcctgatcggcgccttcgttgccacgctggggctgccacagttcaacgcggtcaacgag
cagttccgcgcgcgcatgcagcaggtgttcgggcagggatatgcctatgcctacctgtat
cccgggctgcgcaaggtggtgcaggcggcaggccgggtcatccgcacgcagcaggaccag
ggcgtggtctatctgatcgacgaccgctttgccgcggccgaagtgcgcgagctgctgccg
gcatggtgggaaatcgccacggcggcgtag
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