Cupriavidus sp. KK10: KB879_21295
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Entry
KB879_21295 CDS
T08941
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03030
DNA replication
cuk03430
Mismatch repair
cuk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KB879_21295
03430 Mismatch repair
KB879_21295
03440 Homologous recombination
KB879_21295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuk03032
]
KB879_21295
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_21295
Enzymes [BR:
cuk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KB879_21295
DNA replication proteins [BR:
cuk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KB879_21295
DNA repair and recombination proteins [BR:
cuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KB879_21295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QUN26651
LinkDB
All DBs
Position
complement(4570470..4572065)
Genome browser
AA seq
531 aa
AA seq
DB search
MPDMPTYLPSRLPADGARLLDAQSLAAALSRPIVFVDLETTGADAQRDRITEIGVVEVGP
DGIIEWDTLLDPGMSIPPFIQRMTGITEEMVHGQPTFESLAESLAERLQGRLFVAHNARF
DYGFLKNAFRRAGMTFRADVLCTVRLSRSLFPSVERHGLDALIARFGLTPKGRHRALADA
ELLWQFWQKIHATYSVELVESAVRTLVRRASLPAGLDETALEDVPAAPGVYIFYGDQDVP
LYVGKSVHLRQRIGAHFSGDYRYGKDMRLARLVRRVEWRETGGETGALLLEARLVKAMQP
VHNQLLRRNARLFAWELPQQLPVPRLRSDRDTDFCRHRDLFGVFGNRGAAEARLRALAQE
HGLCLATLSLEKTTRRGSPCFARQVHRCAGACVGAEPSSAHRARLAAALAPIALMPWPFD
GPAAWREQHDGRAWWHVADDWCYLGCAATLEEAQALAAAPAHFDLDTYQILAPRLAQWMP
QAMPLSVHRPFTLTAPEAPAEAPRPARIPAGQTARKAPPAAAQQPLGLFAD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacatgcctacctacctgccgtcgcgcctgccagcggacggtgcgcgcctgctc
gacgcccagtctctcgccgcagcgctgtcgcgccctattgtctttgtcgatctggagact
accggcgcggacgcccagcgcgaccgcatcaccgagatcggcgtggtcgaagtcggcccg
gacggcatcattgaatgggacaccctgctcgaccccggcatgtcgatcccgccgttcatc
cagcgcatgaccggcattaccgaagagatggtgcacggtcagccgaccttcgagtcactg
gcggaatcgcttgccgagcgcctgcaaggccgcttgttcgtggcgcacaacgcgcgcttc
gactatggcttcctgaagaacgccttccggcgtgccggcatgaccttccgggccgacgtg
ttgtgcacggtaaggctgtcgcgctcgctgttcccttccgtggaacgccacggcctggac
gcgctgatcgcacgcttcggcctgacgcccaagggccgccaccgcgcgctggccgatgcc
gagctgctgtggcagttctggcagaagatccatgccacgtattccgtcgaactggtggaa
tcggccgtgcgcacgctcgtgcggcgggccagcctgccggccggcctggacgaaaccgcg
ctggaagacgtgccggcggcgcccggcgtctatatcttctatggcgaccaggacgtgcca
ctctatgtcggcaagagcgtgcacctgcggcaacggatcggcgcccatttctccggcgac
taccggtacggtaaggacatgcggctggcccggctggtacgccgcgtggaatggcgcgag
actggcggcgagaccggcgctctgctgctggaggcccggctggtcaaggcgatgcagcca
gtgcacaaccagctgttgcgccgcaatgcccggctctttgcctgggaactgccgcagcag
ttgccggtgccacggctgcgctcggatcgcgatacggatttctgccggcatcgcgacctg
ttcggcgtgttcggcaaccgcggcgcggccgaggctcgcttgcgcgcactggcgcaggag
cacggcctgtgcctggccacgctgtcgctggagaaaaccacccgccgtggcagcccctgc
tttgcgcgccaggtccatcgctgcgccggggcctgcgtcggcgccgagccgtcgagcgcg
caccgcgcccggctagccgccgccctggcgccgatcgcgctgatgccctggcccttcgat
ggcccggccgcctggcgcgagcagcacgacggacgcgcctggtggcatgtcgccgacgac
tggtgctacctgggctgcgctgccacgctggaagaagcgcaggcgctggcggcggcacca
gcgcatttcgacctcgatacgtaccagatcctcgcgccgcggctggcgcaatggatgcca
caggcgatgccgctgtccgtgcacagaccgttcacgctgaccgcccccgaggcccccgcc
gaggcaccacgcccggcacgcatcccggccgggcagactgcccgcaaggcgccgccggct
gccgcgcagcaacccctgggcttgttcgccgactga
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