Cupriavidus sp. KK10: KB879_23425
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Entry
KB879_23425 CDS
T08941
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cuk
Cupriavidus sp. KK10
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuk03016
]
KB879_23425 (truB)
Enzymes [BR:
cuk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KB879_23425 (truB)
Transfer RNA biogenesis [BR:
cuk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KB879_23425 (truB)
Prokaryotic type
KB879_23425 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QUN27021
LinkDB
All DBs
Position
complement(5024817..5025764)
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AA seq
315 aa
AA seq
DB search
MTDSNANRPPRLPRREVHGVLLLDKPLGLSSNDALVRAKRLLRAAKAGHTGTLDPLATGL
LPLCFGEATKFSQDLLEADKTYDAVVRLGARSSTGDAEGELLDVREVTCDRAAVEQALAS
FLGEIEQVPPMHSALKKDGRPLYEYARAGQTVERAARRVTIRSIALLDCALPNAPSFTMR
VTCSKGTYIRTLAEDIGEALGCGAHLTGLRRIAVGDLTLDGAVTLEQIEQHDDAQRPTML
APVDALLQKCAPVHLDEAAAARFLQGQRIAQRDLPAGTGLAEDALARVYAGEPARLLGVA
RMREGALRPERLVKL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccaacgccaaccgtccgccgcgcctgccgcgccgcgaggtccatggtgtg
ctgctgctcgacaagccgctgggcctgtcgtccaacgacgcgctggtgcgcgccaagcgc
ctcttgcgcgcggccaaggcaggccataccggcacgctggacccgcttgccacggggctg
ctgccgctgtgcttcggcgaggccaccaagttttcgcaagacctgctggaagcggacaag
acctatgacgccgtagtgcggctgggcgcgcgctcgagcacgggcgacgccgaaggcgaa
ctgctcgacgtgcgcgaggtcacctgcgaccgcgccgcggtggagcaggcgctggcaagc
ttcctcggcgagatcgaacaggtgccgccgatgcattcggcgctgaagaaggacggccgc
ccgctgtatgaatacgcgcgcgccggccagaccgtggagcgcgcggcgcgccgcgtcacc
atccgttcgattgcgctgctggactgcgccttgcccaatgccccgtcgttcacgatgcgg
gtgacgtgcagcaagggcacctatatccgcacgctggccgaggacatcggcgaagcgctg
ggctgtggcgcgcacctgaccggactgcgccgcatcgccgtgggcgacctgacgctggac
ggcgcggtgacgctggaacagatcgaacagcacgacgacgcgcagcgcccgaccatgctg
gcacctgtggacgccttgctgcagaagtgtgcgccggtgcatctggacgaggccgctgca
gcgcgcttcctgcagggccagcgcattgcccagcgcgacctgccggccggcaccgggctg
gccgaggatgcgctggcgcgcgtctatgccggcgagccggcccggctgctgggcgtggcg
cgcatgcgcgaaggcgcgttgcggccggagcggctggtcaagctgtaa
DBGET
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