Cupriavidus sp. KK10: KB879_23890
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Entry
KB879_23890 CDS
T08941
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KB879_23890 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuk03021
]
KB879_23890 (rho)
03019 Messenger RNA biogenesis [BR:
cuk03019
]
KB879_23890 (rho)
Transcription machinery [BR:
cuk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KB879_23890 (rho)
Messenger RNA biogenesis [BR:
cuk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KB879_23890 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
S1CSD-TOTE-2
DnaB_C
ATPase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QUN27111
LinkDB
All DBs
Position
5134753..5136015
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AA seq
420 aa
AA seq
DB search
MHLTELKSLHVSALLEMAATLEIDNAQRMRKQELMFAILKKRAKMGETIFGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GQPPEAVKNRIMFENLTPLHPNRPLTLERDIKAEENITGRIIDMIAPIGRGQRALLVASP
KSGKTVMLQHIAHAIANNHPEADLFVLLIDERPEEVTEMMRSVRGEVVASTFDEPAIRHV
QVAEMVIEKAKRLVELKRDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREELLIKPEILQKIWILRKFISDMDEVQAMEFIMDKMKATKNNAEFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacagaactcaaatcgcttcacgtgtctgcgcttctcgaaatggcggctacg
ctcgagatcgacaacgcacaacggatgcgcaaacaggaactgatgtttgcgatcctgaag
aagcgcgccaagatgggcgaaaccatctttggagacggcacgctcgaggtgctgcccgac
ggcttcggcttcctgcgctcgcccgaaacctcgtatctggccagcacggatgacatctac
atcagcccgtcccagatccgccgtttcaacctgcacaccggcgattcgatcgagggtgaa
gtgcgtacgcccaaggacggcgaacgctactttgcactggtcaaggtggacaaggtcaac
gggcagccgcctgaagcggtcaagaaccgcatcatgttcgagaacctgacgccgctgcac
ccgaaccggccgctcacgctcgaacgcgatatcaaggctgaagaaaacatcaccggccgc
atcatcgacatgatcgcgccgatcggccgcggccagcgcgcgctgctggtggcatcgccc
aagtccggcaagaccgtgatgctgcagcacatcgcccacgcgattgccaacaatcatccg
gaagccgacctgttcgtgctgctgatcgacgagcgcccggaagaagtgaccgagatgatg
cgctcggtgcgcggcgaagtggttgcgtcgaccttcgacgaaccggccatccgccacgtc
caggttgccgaaatggtgatcgagaaggctaagcgcctggttgaactgaagcgcgacgtg
gtgatcctgctggactccatcacccgcctggcgcgtgcctacaacaccgtggtgccggcc
tcgggcaaggtgctgaccggtggtgtggacgccaacgcgctgcagcgcccgaagcgcttc
ttcggtgccgcgcgcaacctggaagaaggcggttcgctgaccatcatcgccaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctatgaagagttcaagggcaccggcaac
atggaagtgcacctggaacgccgcctggccgagaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaagagctgctgatcaagccggaaatcctgcagaagatc
tggatcctgcgcaagttcatctccgacatggatgaagtgcaggcgatggaattcatcatg
gacaagatgaaggccaccaagaacaacgccgagtttttcgatatgatgcgcagaggcggc
tga
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