Cupriavidus sp. KK10: KB879_25640
Help
Entry
KB879_25640 CDS
T08941
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03030
DNA replication
cuk03410
Base excision repair
cuk03420
Nucleotide excision repair
cuk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KB879_25640 (polA)
03410 Base excision repair
KB879_25640 (polA)
03420 Nucleotide excision repair
KB879_25640 (polA)
03440 Homologous recombination
KB879_25640 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuk03032
]
KB879_25640 (polA)
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_25640 (polA)
Enzymes [BR:
cuk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KB879_25640 (polA)
DNA replication proteins [BR:
cuk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KB879_25640 (polA)
DNA repair and recombination proteins [BR:
cuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KB879_25640 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KB879_25640 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QUN27424
LinkDB
All DBs
Position
complement(5501897..5504713)
Genome browser
AA seq
938 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDDMYPAYKEHRPSMPEDLARQIEPIHEAVRAMGWPIVVVDGVEADDVIGTL
SRQATEQGVRTVVSTGDKDLAQLVNDQVTLVNTMSGEVLDPPGVVAKFGVPPERIIDYLS
LIGDAVDNVPGVPKVGPKTAVKWLAEHGSLDGVMAAAPGIKGVVGENLRNTLDWLPMARQ
LVTVKTDCDLSAAVADFHALREIGEDKDKLVAFFSRYGFKTWLREATGESLPDARAQARA
RAAAAPAQGGLFDAPATAGEAEAPAADEAAPTEIRYQTVSTEAQLEDWMRRIEAAPLVAI
DTETTSLDPMQAQLVGISLSVVAGEACYIPVAHRGPDVAGLPDHGQLSREFVLERMRAWL
EDASRPKLGQNLKYDVHVFANHGVKLRGVAHDTMLQSYVLASHRNHGMDSLAERLLSLKT
ITYEEVCGKGASQIGFDQIDLARATEYAAEDADVTLRLHRKMFPQVEAAAGLRRVYEEIE
MPVSVVLQKVERNGVLIDAERLAAQSAELGQRMLALEQSAYEAAGQPFNLGSPKQIGEIL
FSQMKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMVNP
QTGRVHTSYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIAEPGSVIVSADYSQIE
LRIMAHISGDENLLRAFANGEDIHRATAGEIFGVEREAVSSEQRRYAKVINFGLIYGMSA
FGLAGNLGIEREAAKNYIDRYFMRYPGVAHYMEETRQTAREQGYVETVFGRRLWLPDING
GSGPRRQAAERAAINAPMQGTAADLIKLSMIAVQAWLERDGLQTRQIMQVHDELVLEVPE
HELELVKVRLPELMCSVAQLRVPLVAEVGSGANWEEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtccaaaaacactcttgctcgtcgacggatcgagctatctgtatcgcgct
tatcacgctctgccggacctgaggaatggggagggtctgcccacaggggcaatctacggc
atgatcaacatgctgcgcaagttgcgcaacgactacccggcagagtatagcgcctgcgtg
ttcgatgcaaagggcaagaccttccgcgacgacatgtatccggcctacaaggaacatcgc
ccgtcgatgccggaagacctggcgcgccagatcgagccgatccatgaggccgtgcgcgcc
atgggctggccgatcgtggtggtggacggcgtggaggccgacgacgtgatcggcacgctg
tcgcgccaggccacggagcagggcgtgcgcacggtggtgtccaccggcgacaaggacctg
gcgcagctggtcaacgaccaggtcacgctggtcaacaccatgagcggcgaggtgctcgat
ccccctggcgtggtggccaagttcggcgtgccgcccgagcgcatcatcgactacctgtcg
ctgatcggtgatgcggtggacaacgtgccgggcgtgcccaaggtgggccccaagaccgcg
gtcaaatggctggccgagcatggctcgctcgacggcgtgatggccgccgctcccggcatc
aagggcgtggtgggcgagaacctgcgcaatacgctggactggctgccgatggcgcgccag
ctggtcacggtcaagaccgactgcgacctctccgccgcggtggcggacttccacgcgctg
cgcgaaatcggcgaggacaaggacaagctggtggcgtttttctcgcgctacggcttcaag
acctggctgcgcgaagcgaccggtgaaagcctgcccgatgcccgcgcccaggcccgcgcc
cgcgcggccgccgcccccgcgcaaggcggcctgttcgatgcgccggccacggccggcgaa
gccgaggcaccggcagcggacgaggccgcgccgaccgagatccgctaccagacggtcagc
accgaagcccagctggaagactggatgcggcgcatcgaggccgcgccgctggtggcgatc
gacaccgagaccacctcgctggacccgatgcaggcacagctggtcggcatctcgctgtcg
gtcgtggcgggcgaggcctgctatatcccggtggcgcaccgtggcccggacgtggccggg
ctgcccgaccacggtcagctgtcgcgcgagttcgtgctggagcgcatgcgcgcatggctg
gaagatgccagccgcccgaagctgggccagaacctcaagtacgacgtccatgtctttgcc
aaccatggcgtgaagctgcgcggcgtggcgcacgacaccatgctgcagagctacgtgctg
gcctcgcaccgcaaccatggcatggacagcctggccgagcgcctgctgagcctgaagacc
atcacctatgaagaggtgtgcggcaagggcgccagccagatcggcttcgaccagatcgac
ctggcgcgcgccaccgaatacgccgccgaagacgctgacgtgacgctgcgcctgcaccgc
aagatgttcccgcaggtggaagccgcggcgggcctgcgccgcgtgtatgaagagatcgag
atgccggtctcggtggtgctgcagaaggtcgagcgcaacggcgtgctgatcgatgccgaa
cgcctggccgcgcagagcgccgagctgggccagcgcatgctggcgctggagcagtccgcg
tacgaagccgcgggccagccgttcaacctgggctcgcccaagcagatcggcgagatcctg
ttcagccagatgaagctgccggtggtgaagaagaccgccagcggtgcgccctcgaccgac
gaagaggtgttgcagaagctggccgaggactacccgctgcccaagctgctgctggactac
cgcggcctggccaagctcaagtccacctataccgacaagctgcccaagatggtcaacccg
cagaccggccgtgtgcacaccagctacggccaggccaccgcggtgaccggccggctggcg
tcgaccgagcccaacctgcagaacatcccggtgcgcaccgaggaaggccgccgcatccgc
gaagcctttatcgccgagccgggcagcgtgatcgtctcggccgactattcccagatcgaa
ctgcgcatcatggcccatatctcgggcgacgagaacctgctgcgcgcgtttgccaacggc
gaggacatccaccgcgccaccgccggcgagatcttcggtgtcgagcgcgaggccgtcagc
agcgagcagcgccgctacgccaaggtgatcaacttcggcctgatctacggcatgagcgcg
ttcggcctggccggcaacctgggcatcgagcgcgaggccgccaagaactatatcgaccgc
tatttcatgcgctatcccggcgtggcccactacatggaagagacccggcagaccgcgcgc
gagcagggctatgtcgagaccgtgttcggccgccggctgtggctgcccgacatcaacggc
ggcagcggcccgcgccgccaggccgccgagcgcgccgccatcaacgcgccgatgcagggc
accgctgccgacctgatcaagctgtcgatgatcgcggtgcaggcctggctggagcgcgac
gggctgcagacgcgacagatcatgcaggtgcacgatgaactggtgctggaggtgccggag
cacgaactggagctggtcaaggtgcggctgccggagctgatgtgctcggtggcgcagctg
cgcgtgccgctggtggccgaagtgggcagcggcgccaactgggaagaagcgcactga
DBGET
integrated database retrieval system
