Cupriavidus sp. KK10: KB879_25685
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Entry
KB879_25685 CDS
T08941
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03420
Nucleotide excision repair
cuk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KB879_25685
03430 Mismatch repair
KB879_25685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_25685
Enzymes [BR:
cuk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KB879_25685
DNA repair and recombination proteins [BR:
cuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KB879_25685
MMR (mismatch excision repair)
Other MMR factors
KB879_25685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AbiJ_NTD5
Motif
Other DBs
NCBI-ProteinID:
QUN27432
LinkDB
All DBs
Position
complement(5513863..5516211)
Genome browser
AA seq
782 aa
AA seq
DB search
MSDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGRVSPAGILAVTF
TNKAAKEMQTRLSSMLPINTRGMWIGTFHGLCNRMLRAHFRDAGLPQTFAILDSQDQLSA
LKRLLKSLNVDDEKYPAKNLQYFINNAKEQGLRPADVEANDDFNKRFVDLYAAYDLQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHVLVDEFQDTNVLQYQWLKLLAGYGTLN
PAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRRLIKLEQNYRSHGHILDSANHLISH
NARRLGKNLRTDAGHGEPVRVFQGGSDGQEAAWIIEEIRDQIAQGASRAEIAILYRSNAQ
SRVIEHALFSAGIAYRVYGGLRFFERAEIKHALAYMQLLENPRNDAAFGRVVNFPARGIG
ARSLEVLQDMARQYDCALAEAVAYVPGAAGSKLAAFTRLVEKMRDDTRRMTLAETVEYVI
NHSGLITHYQGEKEGQDRIENLQELVTAAQAFVVEEGYGLEALAAVIPVDRSPAAPALAD
GDQAQQVLDPEALPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFDVVF
ITGMEEGLFPHENSMMDPDGVEEERRLMYVAITRARKRLYMSFAQSRMLHGQTRYHVRSR
FFEELPEASLKWLTPPAQGYGGVRRQERDSAWGRDWFRKPEDVPYTGTRPTGGMDNGNGY
ADAKREAGTGFRVGQSVFHNKFGEGVITALEGEGTDARANINFKRNGAKWLALSVAKLDA
ID
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgcttgccaacctgaacgccgaacaactagccgccgtcaccctgcctgac
gagccggcgctgatcctggcgggcgcgggcagcggcaagacccgcgtgctgaccacgcgc
atcgcctggctgatccagaacggccgggtctcaccggcgggcatcctggcggtgaccttt
accaacaaggccgccaaggaaatgcagacgcggctgtcgtcgatgctgccgatcaacacc
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatttc
cgcgacgccggcctgccccagacctttgccatcctggacagccaggaccagctttcggcg
ctcaagcggctgctcaagtcgctcaacgtcgacgatgagaagtacccggccaagaacctg
cagtacttcatcaacaatgccaaggagcagggcctgcgcccggccgacgtcgaggccaac
gacgacttcaacaagcgctttgtcgacctctatgcggcctacgacctgcagtgccagcgc
gagggcgtggtcgactttgccgagctgctgctgcgctgctacgagctgctgcgctacaac
gacgccatccgccagcactaccagcaccgcttccgccacgtgctggtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctcaagctgctggccggctacggcacgctgaac
ccggccgcagtctttgccgtcggcgacgacgaccagagcatctatgcgttccgcggcgcc
aacgtcggcaatatgcgcgacttcgagcacgagttccgcgtgcgccggctgatcaagctg
gagcagaactaccgctcgcacgggcatatcctggattcggccaaccacctgatctcgcac
aacgcgcgccgcctgggcaagaacctgcgcaccgacgccggccatggcgagccggtgcgg
gtgttccagggcggctctgacggccaggaagccgcctggatcatcgaggagatccgcgac
cagatcgcgcagggcgccagccgcgccgagatcgccatcctgtaccgcagcaacgcgcag
tcgcgcgtgatcgaacatgcgctgttctcggccggcatcgcgtaccgcgtctatggcggc
ctgcgcttctttgagcgcgccgaaatcaagcacgcgctggcctacatgcagctgctggag
aatccgcgcaacgatgccgcctttggccgcgtggtcaacttcccggcgcgcggcatcggc
gcgcgctcgctggaagtgctgcaggacatggcgcgccagtacgactgcgcgctggccgag
gcggtggcctacgtgcccggcgcggccggcagcaagctggcggcctttacgcgcctggtc
gagaagatgcgcgacgatacccgccgcatgacgttggccgagaccgtcgagtacgtgatc
aaccacagcggcctgatcacccactaccagggcgagaaggaaggccaggaccgcatcgag
aacttgcaggaactggtgaccgccgcgcaggccttcgtggtcgaggaaggctacggcctg
gaagcgctggccgcggtgattccggttgaccgcagccccgccgccccggcactggccgac
ggcgaccaggcccagcaggtgctggatccggaagcgctgccggtggtgatgacgccgctg
gtcgcgttcctgacccatgcctcgctggaagccggcgacaaccaggcccaggccggccag
gacgcggtgcagatgatgaccgtgcacgcggccaaggggctggaattcgacgtggtcttc
atcaccgggatggaagagggcctgttcccgcacgagaacagcatgatggacccggacggc
gtggaagaagagcgccgcctgatgtacgtggcgatcacgcgtgcgcgcaagcggctctac
atgtcgttcgcgcaaagccgcatgctgcacggccagacccgctaccacgtgcgctcacgc
ttcttcgaggaactgcccgaggcctcgctcaagtggctgacgccgccggcgcagggctac
ggcggcgtgcgccgccaggagcgcgacagcgcctggggccgcgactggttccgcaagccc
gaggacgtgccctataccggcacgcgccccaccggcggcatggacaacggcaatggctat
gccgatgccaagcgcgaggccggcaccggcttccgggtggggcagtcggtgttccacaac
aagtttggcgaaggcgtgatcaccgcgctggaaggcgaaggcacggacgcacgcgccaat
atcaacttcaagcgcaacggcgccaagtggctggcgctgtcggtggcgaagctggacgcg
atcgactga
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