Cupriavidus sp. KK10: KB879_29810
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Entry
KB879_29810 CDS
T08941
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KB879_29810 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuk03019
]
KB879_29810 (recQ)
03400 DNA repair and recombination proteins [BR:
cuk03400
]
KB879_29810 (recQ)
Enzymes [BR:
cuk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KB879_29810 (recQ)
Messenger RNA biogenesis [BR:
cuk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KB879_29810 (recQ)
DNA repair and recombination proteins [BR:
cuk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KB879_29810 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QUN31603
LinkDB
All DBs
Position
complement(6385592..6387439)
Genome browser
AA seq
615 aa
AA seq
DB search
MSHALAILKDVFGYHAFRGRQAEIIDHVATGGDCLVLMPTGGGKSLCYQIPALLRQRAGD
GVGIVVSPLIALMQDQVAALTEAGVRAAVLNSTLTGAEASAVERDLLAGRIEILYVAPER
LMTPRFQDLLERIRVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPYVPRIALTATAD
ALTRNEIIERLALDNARVFISSFDRPNIRYRIVEKDNARQQLLAFIKAEHTAADGTHDSG
IVYCLSRKKVEDTAQWLSGQGINALGYHAGMDAQVRQHHQARFREEEGLVMVATIAFGMG
IDKPDVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVQQKRMIDESEADE
AFKRVSSSKLDALLGLCETAGCRRVRILAYFNEASEPCGNCDTCLEPPATWDGTREAQMA
LSCVYRTAQASRVHFGATHLIDVLRGNSSEKIRQWGHDKVSTFGIGKDRSVHEWHTVFRQ
LIAQGLLTIDHGGHGALLLGEDARAVLKGERQIILRRQATKPGKSGERAARGTRTDHTAD
MDADMLANWEALRRWRTEAAREHGVPAYVIFHDATLAELARTAPGSLSAMQGIPGIGASK
LERYGQSILEALRGV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgcgctggcgatcctcaaagatgtgttcggctaccacgccttccgtgggcgc
caggccgagatcatcgaccacgttgcgacgggcggcgactgcctggtgctgatgccaacc
ggcggcggcaagtcgctgtgctaccagatcccggcgctgctgcgccagcgtgccggcgac
ggcgtcggcatcgtggtgtcgccgttgatcgcgctgatgcaggaccaggtcgcggcactg
accgaagccggcgtgcgcgccgcggtgctcaattcgacgctgaccggggccgaggcctcg
gcggtcgagcgcgacctgctggccgggcgcatcgagatcctctacgtggcgccggaacgg
ctgatgacgccgcgcttccaggacttgctcgagcgcattcgggtcgggctctttgccatc
gacgaagcgcactgcgtgtcgcagtggggccacgacttccgccccgagtacatccagttg
tcggtgctgcatgagcgcttcccgtacgtgccgcgcatcgcgctgacggcaacggccgac
gcactcacgcgcaatgagatcatcgagcgcctggcgctggacaacgcccgcgtcttcatc
tccagcttcgaccggcccaatatccgctaccgcatcgtcgagaaggacaatgcgcgccag
cagctgctggccttcatcaaggccgagcacaccgcggccgacggcacccatgacagcggc
atcgtctattgcctgtcgcgcaagaaggtggaagacacggcacagtggctgagcgggcag
ggcatcaatgcgctgggctaccacgccggcatggatgcccaggtgcgccagcaccaccag
gcgcgcttccgcgaggaagaagggctggtgatggtggcgacgatcgccttcggcatgggc
atcgacaagcccgacgtgcgctttgtcgcccacctggacctgcccaagagcatggaaggc
tactaccaggaaaccgggcgcgccggccgcgacggcctgccggccaatgcctggatggcc
tacggcctgggcgacgtggtgcagcagaagcgcatgatcgacgagtccgaggcggacgag
gccttcaagcgcgtgtcgtcgtccaagctcgatgcgctgctgggcctgtgcgagaccgcg
ggctgccggcgcgtgcgcatcctggcgtatttcaacgaggccagcgaaccctgcggtaac
tgcgatacctgtctggagccgccggcgacctgggacggcacgcgtgaggcgcagatggcg
ctgtcgtgcgtgtaccgcactgcccaggcgagccgggttcacttcggcgccacccacctg
attgacgtgctgcgcggcaacagctcggagaagatccgccagtgggggcacgacaaggtg
tccaccttcggcatcggcaaggaccgctcggtgcatgaatggcatacggtgttccgccag
ctgatcgcccaggggctgctgaccatcgaccatggcggccatggcgcgctgctgctgggc
gaggacgcgcgcgcggtgctcaagggcgagcgccagatcatcttgcgtcgccaggccacc
aagccgggcaagtccggcgagcgtgccgcacgcggcacccgcaccgaccacaccgcggac
atggatgccgacatgctggccaactgggaggcgctgcgccgctggcgcaccgaggccgcg
cgtgagcacggggtgccggcctatgtcatcttccacgatgcaacgctggcggagctggcc
cggaccgcgccgggatccctgtcggcgatgcagggcattcccgggattggtgcctccaag
cttgagcgctacgggcagtccatcctggaagcgctccgcggggtctga
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