Cupriavidus sp. KK10: KB879_30860
Help
Entry
KB879_30860 CDS
T08941
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cuk
Cupriavidus sp. KK10
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuk03009
]
KB879_30860 (rsmB)
Enzymes [BR:
cuk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
KB879_30860 (rsmB)
Ribosome biogenesis [BR:
cuk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KB879_30860 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QUN28365
LinkDB
All DBs
Position
complement(6614827..6616248)
Genome browser
AA seq
473 aa
AA seq
DB search
MRLPPDSLAFQMLGAATAVRAVSEGTALPQAIEDAAAQLRLDRVRDAATRGALQDIAYRT
MRQFGTARALVTKLVTRPPGAQVDSLLAVALALLLEHAPGPRDKQDSADKARQDADAGRP
GYSTFTVVDQAVSAAASEPKTAHARGLVNAVLRRFLRERKALLADVNRDEQARWNLPPWW
LRMLREAYPDQWMALAASANVRPPMTVRVNTARVSVQQYQTDLANAGLAGHVVGPQAVRL
VRAVPVTQLPGFAEGVVSVQDAGAQLAAPLLEVADGMRVLDACAAPGGKTGHLLELADID
VTAVESDPQRTTRIGENLARLGKQARIVVGDASRPADWWDGQLFDRILADVPCSASGIVR
RNPDIRWLRRETDIAKLITEQRRIVSQLWPLLKPGGILVYVTCSIFPTEGEEQARWFGAQ
LADAIRLQAPGQLLPGTHTTQAAGANGEKDATAGTSLPSDHDGFFYARFQKRA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcctcccgattcgcttgccttccagatgcttggcgccgccaccgcggtgcgc
gccgtcagcgaaggcacagccttgccccaggcgatcgaggacgccgccgcacagctgcgc
ctggaccgcgtgcgcgatgccgccacgcgcggcgcgctgcaggacatcgcctatcgcacc
atgcgccagttcggcacggcacgcgcactggtgacgaagctggtcacgcgcccgccgggc
gcgcaggtcgattcgctgctggccgtggcactggcgctgctgctggagcacgcgccgggc
ccgcgcgacaagcaggacagcgcggacaaggcgcgccaggacgcggacgccggccgcccg
ggctacagcaccttcacggtggtcgaccaggcggtcagcgccgccgcctccgaacccaag
actgcgcatgcgcgcggcctggtcaacgcggtgctgcgccgtttcctgcgcgaacgcaag
gcgctgctggccgacgtcaaccgcgacgagcaggcgcgctggaacctgccgccgtggtgg
ctgcgcatgctgcgcgaggcctacccggaccagtggatggccctggccgccagcgccaac
gtgcgcccgccgatgacggtgcgcgtcaacaccgcgcgcgtgtccgtgcagcagtaccag
accgatcttgccaacgccggcctggctggccatgtggtcggcccgcaggccgtgcgcctg
gtgcgcgcggtgccggtgacgcagttgccgggctttgccgaaggcgtggtctcggtgcag
gatgccggcgcgcagctggccgcgccgctgctcgaggtggccgacggcatgcgcgtgctg
gatgcctgcgcggcgcccggcggcaagaccgggcacctgctggaactggccgatatcgac
gtcaccgcagtggaaagcgatccgcagcgcaccacccgcatcggcgagaacctggcgcgc
ctgggcaagcaggccaggatcgtggtcggcgatgccagccggcccgccgactggtgggac
ggccagctctttgaccgcatcctggccgacgtgccgtgctccgcttcgggcattgtgcgg
cgcaatcccgatatccgctggctgcgccgcgagaccgatattgccaagctcatcaccgag
cagcgccgcatcgtctcgcaactgtggccgctgctcaaaccgggcggcatcctggtctat
gtcacctgttctattttcccaacggaaggcgaggagcaggcgcgctggtttggtgcacag
ctggcagatgcgatacgattgcaggcgccggggcagctgctgcccggcactcataccacg
caagcagccggcgccaatggcgaaaaggacgccacggccggcaccagcctgccgtcggat
cacgatggcttcttctacgcccgcttccagaaacgcgcctga
DBGET
integrated database retrieval system
