Curtobacterium sp. MR_MD2014: NI26_09110
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Entry
NI26_09110 CDS
T04180
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cum
Curtobacterium sp. MR_MD2014
Pathway
cum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NI26_09110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cum03021
]
NI26_09110
03019 Messenger RNA biogenesis [BR:
cum03019
]
NI26_09110
Transcription machinery [BR:
cum03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NI26_09110
Messenger RNA biogenesis [BR:
cum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NI26_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AIV41508
LinkDB
All DBs
Position
complement(1971655..1973838)
Genome browser
AA seq
727 aa
AA seq
DB search
MEIPSDLRALRLPELQRIASSLGITGLSKLRKGDLIASIEDKRPATDDAAPAAETPADEA
PAAAEAAPAAQETPAEQPTLAAPATSPAADDAAADQTESAPEPRGRRSRRASSAGTVNTA
QTSAAEHTNHGHTGTEDLLAGLDQVRAEKDAEEAAQSGRRRGRRGNQDAGQQDGGQQRDG
AEQAAAPETDEATGAQPTSATDQGDQADQQGEGGSRRGRRSRGRGRGRGQNAEGTEQQSG
DQQGGQQNGGQQNGGQANAGQQNGQQQKQNGKQDEQKSGDAKQDDRQPKQNGQQKQNGQQ
QNAQQQQHADEAEAGRGRRQRDRKRGRGGQNDEFEPEITEDDVLIPIAGILDVLDNYAFV
RTTGYLPGPSDVYVSLGQVKKYHLRKGDAIVGAIKQPRDNEQQARQKYNALVKVDSVNGQ
TADEAAARVEFHDLTPLYPNERLRLETEPAKLSTRIIDLVAPIGKGQRGLIVSPPKAGKT
VVLQAIANAIAKNNPEAHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPAEDHTTVAEL
AIERAKRLVELGHDVVVLLDSITRLGRAYNLATPASGRVLSGGVDSAALYPPKRFFGAAR
NIEDGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLNRHLADKRIFPAVDINASGT
RREEQLLSADEVKITWRLRRALAGLDPQQALDVVLRNLKETQSNVEFLVQVQKSVPTTGG
RHDGHQE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtggagatccccagcgacctgcgcgcgctccgtctcccggagctccagcgcatcgcctcc
tcgctcggcatcacggggctctcgaagctccgcaagggcgacctcatcgcgtcgatcgag
gacaagcgccccgcgaccgacgacgccgcccctgctgccgagacgccggctgacgaggca
cccgccgccgcggaggccgcacccgcggcgcaggagacccccgccgagcagccgacgctg
gccgcaccggcgacctcgccggccgccgacgacgccgcagccgaccagacggagtcggct
ccggagccccgcggtcgccgctcgcgccgcgcctcctcggccggcacggtgaacaccgcg
cagacctcggccgcggagcacacgaaccacgggcacaccggcaccgaggacctgctcgcg
gggctcgaccaggtccgtgccgagaaggacgcggaggaggccgcgcagtccggtcgccgc
cgcggccgccgcgggaaccaggacgccggccagcaggacggcggccagcagcgggacggc
gccgagcaggccgctgcccccgagaccgacgaggcgaccggcgcgcagccgacctcggcg
acggaccagggcgaccaggccgaccagcagggcgagggcggttcgcgccgcggacgtcgc
agccgtggtcgcggtcgtggccgcgggcagaacgccgagggcaccgaacagcagagcggt
gaccagcagggcggccagcagaacggtggccagcagaacggtggccaggcgaacgccggc
cagcagaacggtcagcagcagaagcagaacggcaagcaggacgagcagaagtccggcgac
gcgaagcaggacgaccgtcagccgaagcagaacggccagcagaagcagaacggccagcag
cagaacgcccagcagcagcagcacgccgacgaggccgaggccggccgcggtcgtcgtcag
cgtgaccgcaagcgcggccgcggcggccagaacgacgagttcgagccggagatcaccgag
gacgacgtcctcatcccgatcgcgggcatcctcgacgtcctcgacaactacgcgttcgtc
cgcacgaccggctacctgccgggaccgagcgacgtctacgtgtccctcggccaggtgaag
aagtaccacctgcgcaagggcgacgcgatcgtcggtgcgatcaagcagccgcgcgacaac
gagcagcaggcgcgccagaagtacaacgcgctcgtcaaggtggactcggtcaacggccag
accgcggacgaggcagctgcccgtgtcgagttccacgacctgaccccgctgtacccgaac
gagcgtctccgcctcgagaccgagccggcgaagctcagcacgcgcatcatcgacctggtc
gcaccgatcggcaagggtcagcgcggcctcatcgtctcgccgcccaaggccggcaagacc
gtcgtgctgcaggccatcgccaacgcgatcgccaagaacaaccccgaggcgcacctcatg
gtcgtgctcgtggacgagcggcccgaagaggtcaccgacatgcagcgctcggtgaagggc
gaggtcatcgcctcgaccttcgaccgtccggcggaggaccacaccacggtcgccgagctc
gccatcgagcgtgcgaagcgcctggtcgagctgggccacgacgtcgtcgtgctcctcgac
tcgatcacccgtctcggccgcgcctacaacctggcgacgccggcctccggccgcgtgctc
tccggtggcgtggactcggcggccctgtacccgccgaagcgcttcttcggcgctgcgcgc
aacatcgaggacggcggctcgctgaccatcctcgccaccgcgctcgtcgagaccggctcc
aagatggacgaggtcatcttcgaggagttcaagggcaccggcaacatggagctccgcctc
aaccggcacctcgccgacaagcggatcttcccggccgtcgacatcaacgcctccggcacc
cggcgcgaggagcagctcctctccgccgacgaggtcaagatcacgtggcgcctgcgccgt
gccctcgccgggctcgacccgcagcaggcgctcgacgtcgtcctccgcaacctcaaggag
acgcagtcgaacgtcgagttcctggtccaggtgcagaagtcggtccccacgaccggcggt
cgccacgacggccaccaggagtaa
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