Curtobacterium sp. MR_MD2014: NI26_15145
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Entry
NI26_15145 CDS
T04180
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cum
Curtobacterium sp. MR_MD2014
Pathway
cum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NI26_15145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cum03021
]
NI26_15145
03400 DNA repair and recombination proteins [BR:
cum03400
]
NI26_15145
Enzymes [BR:
cum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NI26_15145
Transcription machinery [BR:
cum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NI26_15145
DNA repair and recombination proteins [BR:
cum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NI26_15145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AIV41098
UniProt:
A0A0N7A1K7
LinkDB
All DBs
Position
complement(3250118..3253999)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLEATSFDAIRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHADMPGLENEMRLEIKNLEGQRDSIIADRLKKLEDD
LAALEEEGAKADVKRRTKDTAEKEMSQVRKSFDEDITRLERVWEDFRNLKVGDLKPEDAV
FHELQDRFGIYFDAYMGAEAIKLRLEAFDLAAEAESLRLQIAEGKGQKKIRAIKRLRVVS
SFLATGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKSAKRMVERSR
PQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPAQDMIIGLHHLTTVREGALGEGR
AFSSVAEAILAKDQNTLHLNAMVKIRMSGVHFAEGEAPEGYEVGQPILLETTLGRALFNE
TLPADYPFVQRVTDKGTLSAIVNDLAERYSKTETAAALDRIKDAGFYWGTRSGVTVALSD
VVTPPRKKEIIAGYEVQAAKVQGEFDKGLITDAERRADLIKIWTEATNEIAQEMRDNFPV
DNTINRMVSSGARGNWLQVRNIAGMRGLVNNPKGEIIARPIINSYREGLTVAEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTRGLELPIATVGADGALVRDPR
VENTVYSRTLATEAADAKGTVVAEAGSDVGDVLLDTLLEAGVESIKVRSVLTCESAVGVC
AKCYGRSLATGNLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVTE
LFEARTPKGASPIAEAPGRVTIEDTDKGRRIILTPDNGDEPFIYPVLKRATLLIEDGQHV
ELGEQFIAGTVDPKEVLRVKGVREVQKHLVNGVQDVYGSQGVPIHDKHIEVIVRQMLRKV
TVVDHGDTDLLPGELVDRSRYNALNRAALQEGRKTASARQEVMGITKASLATESWLSAAS
FQETTRVLTQAAMEGKQDHLVGLKENVIIGKLIPAGTGLSRYRDVDVAATEEAKAERYPN
RIFADDSSFSDADLSFVDFDSFSSDDFTPGTYN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaagcaacgtcatttgacgccatccggatcggcctcgcgaccgccgaggacatc
cgtcagtggtcgtacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgagaaggacggtctgttcggcgagcagatcttcggtccgtcccgcgactgggagtgc
gcctgcggcaagtacaagcgtgtccgcttcaagggcatcgtctgcgagcgctgcggcgtc
gaggtcaccaagtcctcggtccgtcgtgagcgcatgggccacatcgagctcgccgccccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctcgggtacctcctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcatcgacatcgat
gaagagggccgtcacgccgacatgcccggtctcgagaacgagatgcgcctcgagatcaag
aacctcgagggtcagcgcgactcgatcatcgccgaccgcctcaagaagctcgaggacgac
ctcgcagcgctcgaggaagagggcgccaaggccgacgtgaagcgccggaccaaggacacc
gccgagaaggagatgtcccaggtccgcaagtccttcgacgaggacatcacccgcctcgag
cgcgtgtgggaggacttccgcaacctcaaggtcggcgacctcaagcccgaggacgccgtg
ttccacgagctgcaggaccgcttcgggatctacttcgacgcctacatgggcgccgaggcg
atcaagctgcggctcgaggccttcgacctggccgccgaggccgagtcgctgcgcctgcag
atcgccgagggcaagggtcagaagaagatccgcgcgatcaagcgcctgcgcgtcgtcagc
tccttcctcgccaccggcaactcgccggccgcgatggtgctcgacgtcgtgccggtcatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgcttcgccacgtcggacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctccgccgcctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaagcggtcgacgcg
ctgttcgacaacggtcgtcgtggtcgtcccgtcacgggtaccggcaaccgcgccctgaag
tccctgagcgacatgctcaagggaaagcagggtcgcttccgccagaacctgctcggcaag
cgcgtcgactactcgggtcgttcggtcatcatcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagcagatggcgctcgagctgttcaagccgttcgtcatcaagcgcctc
atcgacctgtcgcacgcgcagaacatcaagtcggccaagcgcatggtcgagcgttcgcgt
ccgcaggtgtgggacgtgctcgaggagatcatccgcgagcgccccgtcctgctgaaccgt
gcgccgacgctgcaccgtctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctccacccgctcgtgtgtgctgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctcaagccgtcggacggccgtccggtgaccctgcccgcacaggac
atgatcatcggtctgcaccacctgacgaccgtccgcgagggcgcgctcggcgagggccgt
gcgttctcgtcggtcgccgaggcgatcctggccaaggaccagaacacgctgcacctcaac
gcgatggtgaagatccgcatgtcgggtgtccacttcgccgagggcgaggcgccggagggc
tacgaggtcggtcagccgatcctcctcgagaccaccctgggccgtgcgctcttcaacgag
acgctgccggcggactacccgttcgtccagcgcgtcaccgacaagggcaccctctccgcg
atcgtcaacgacctcgccgagcgctactccaagaccgagacggccgctgcgctggaccgg
atcaaggacgcgggcttctactggggcacgcgctccggtgtgaccgtggcgctgtcggac
gtcgtgacgcctcctcgcaagaaggagatcatcgcgggctacgaggtccaggccgccaag
gtccagggcgagttcgacaagggtctgatcaccgacgcggagcgccgcgccgacctgatc
aagatctggaccgaggccacgaacgagatcgcgcaggagatgcgcgacaacttcccggtc
gacaacaccatcaaccgcatggtctcgtcgggtgctcgtggtaactggctgcaggtgcgc
aacatcgccggtatgcgtggtctggtgaacaacccgaagggtgagatcatcgcccgcccg
atcatcaactcgtaccgcgagggcctgaccgtggcggagtacttcatcgccacgcacggt
gcccgcaagggtctggcggacacggctctccgtaccgccgactcgggctacctgacccgt
cgtctcgtcgacgtgtcgcaggacgtcatcatccgtgaggacgactgcgggacgacccgt
ggcctcgagctgccgatcgcgaccgtgggtgccgacggcgccctcgtccgcgacccgcgc
gtcgagaacaccgtctactcgcgcacgctggccaccgaggcagcggacgcgaagggcacg
gtcgtcgccgaggccggttcggacgtcggtgacgtcctgctggacacgctgctcgaggcg
ggtgtcgagagcatcaaggtgcgctcggtcctgacctgcgagtcggccgtcggtgtctgc
gcgaagtgctacggccgttcgctcgccacgggcaacctcgtcgacatcggcgaggcggtc
ggcatcatcgccgcccagtccatcggtgagcccggtacccagctgacgatgcgtaccttc
cacacgggcggttcggcctcggccgacgacatcacgcagggtctgccccgcgtgaccgag
ctcttcgaggcccgcaccccgaagggcgcgtccccgatcgccgaggcccccggccgcgtc
acgatcgaggacacggacaagggtcgtcggatcatcctcacgccggacaacggcgacgag
ccgttcatctacccggtgctcaagcgtgcgaccctcctcatcgaggacggccagcacgtc
gagctcggcgagcagttcatcgccggcacggtggacccgaaggaggtcctccgggtcaag
ggtgtgcgcgaggtccagaagcacctcgtcaacggtgtgcaggacgtgtacggctcgcag
ggcgtgccgatccacgacaagcacatcgaggtcatcgtccgccagatgctccgcaaggtc
accgtcgtcgaccacggcgacaccgacctgctgccgggtgagctcgtcgaccggtcgcgc
tacaacgcgctgaaccgtgcggcgctgcaggagggtcgcaagaccgcctcggctcgccag
gaggtcatgggcatcacgaaggcgtccctcgcgaccgagtcgtggctgtccgccgcgtcc
ttccaggagaccacccgcgtcctcacgcaggcggccatggagggcaagcaggaccacctc
gtcggcctcaaggagaacgtcatcatcggtaagctcatccccgccgggacgggcctcagc
cggtaccgtgacgtggacgtcgccgcgaccgaggaagccaaggcggagcggtaccccaac
cgcatcttcgccgacgactcctcgttctcggacgccgacctgagcttcgtcgacttcgac
agcttctcgtcggacgacttcacgcccgggacctacaactga
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integrated database retrieval system
