Corynebacterium ulcerans 210932: Cul210932_0621
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Entry
Cul210932_0621 CDS
T03406
Symbol
uvrD2
Name
(GenBank) DNA helicase, UvrD/REP type
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cun
Corynebacterium ulcerans 210932
Pathway
cun03420
Nucleotide excision repair
cun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cul210932_0621 (uvrD2)
03430 Mismatch repair
Cul210932_0621 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cun03400
]
Cul210932_0621 (uvrD2)
Enzymes [BR:
cun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cul210932_0621 (uvrD2)
DNA repair and recombination proteins [BR:
cun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul210932_0621 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
Cul210932_0621 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIT88585
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All DBs
Position
628377..631601
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AA seq
1074 aa
AA seq
DB search
MIDPIELSRLLKQKFPPTPQQAAVIGAELGPMLVVAGAGAGKTETMAARVVWLVANNMVD
PDRILGLTFTRKAAQQLSQRIRGRLEQLAGMDALKDIDPSGELSHKLEAIAPTVSTYDSY
AGSLISEYGLLLPVEPSSRLITETELFQIAYDIVINYSGALDAQTQPVSATEKLLSLVSD
MDNHIVSPQDIVEETDAFLSVLDDVEATSKRGLNQTLTGWKQRQIIRKQMLPMVAMLKQH
LAQNNLMTFGEQMSLAARLAEENPQVGASQRDRYSVVMLDEYQDTGHAQRVLLRSLFSGA
AVTAVGDPMQSIYGWRGATSANLERFREDFALGDDLAQKRELTVSFRNPPEVLQLANEVS
REVLGAPDNPRRTVQPLSSREGAPHGEVTLGFFPSAEKEREFIADELAEAYKNRGENFTA
AVLVRKKRHSAPIALELQARGVPVEIVGLAGLIDVPEVADMIAVAAMLIRPQDTQSALRI
LAGPHVGLGAADILALANRAANLAGRGKDDREEKKTDPLERLEQIIAETLPKAPEAVVGL
AEAVADLDAPREEDSSTRYSDEGLRRLRLLASELRYLRTHSLGHSLPDLFADIERVFGIR
TEVLQREDPHDDGAPGTAHLDRFAEVVSDFARVPHATLSQFLDYLELSRSHEDGLEPGEV
QVRSDRVQILTVHKAKGLEWQIVSVAHADSSTYKTRTSTWLSNESAVPSALRGDAREDDS
LVGAPVWYIDSPESPADLKKQGDAHIAEFRAVEEEENARLFYVALTRAEERVLVTASTDI
TKASPPGPYTHLEMLRTKVPDSVVEWFDGDTDDALEPPLPETGVFPQELRPEGVDAVKKA
MVELPALIKDGDLFERWEQEVTALIEEHQQLSTPVVPVELGLELTASDIVNLSQDPQAFA
RRRRRPVPFKPNSYAKRGTAFHQWLEDRFGATALLDAEELPGIDDALDGTELETLKARFL
DSEWADRTPEYVEHPFEVSIGEHIVRGRMDAVFKNADGQWIVVDWKTGQPPAEAAERRSV
SLQLAVYRLAWARLRGVDPSEVQALFHYVGRNFSYQPSELPDEASLAHMLTLNM
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgatagatccgattgagttatcgcggttactcaagcagaaattccctcctacgccgcag
caagcggctgtcataggcgctgaactcggacctatgctggtagtagctggtgcgggtgct
ggtaagacggaaaccatggctgctcgcgtggtatggctggtggccaataacatggtggat
cccgatcgcatcttagggctgacgttcaccaggaaagctgcccaacagctctctcaacgt
atccgaggcaggcttgaacaacttgcaggtatggatgcgttgaaagacattgatccaagc
ggggagctgtctcataagttagaggctatcgccccaacggtctctacatacgactcctat
gctggcagtttgatcagcgaatatggtttgcttttacccgtggagccctcatcacggttg
atcacagagactgagctttttcagatcgcctacgacattgttatcaactattcgggggcc
ctagacgcgcagactcaaccggtgagtgcgacggaaaaactcttgtctttggtgtctgac
atggacaaccatatcgtttcgccgcaggacattgtggaagagacggatgcatttttatcg
gtgctggatgacgtggaggcgacgtcgaaacgcgggctgaatcagactcttactgggtgg
aagcagcggcagataattcgcaagcagatgttgcccatggttgcgatgctcaagcaacac
ctggctcagaataatctcatgacattcggggaacagatgtcgctcgccgctaggcttgct
gaggaaaatccgcaggtaggagcttcccaacgagatcggtattccgtggtgatgctggat
gaataccaggacaccggacacgcgcagcgggtattattacgcagtctctttagcggtgct
gcagtcaccgcagtgggggacccgatgcagtcgatctacgggtggcgtggggctacttct
gccaatcttgagcgttttagagaggactttgctttaggcgatgacctcgctcaaaagcgc
gagctaacagtgagcttccgtaatcctcccgaggttcttcagctggctaatgaggtatcc
agggaagtccttggcgccccggataatcctcgtcgaacagtacagccgctttcttcccgt
gaaggtgctccgcatggggaggtgaccctgggctttttccctagcgcggaaaaagaacga
gaatttatagccgacgagttggcggaggcttataaaaatcggggagagaattttaccgcc
gctgtgttggtccgaaagaaacggcattctgcccccatcgctttagagctgcaagcgcgg
ggagttcccgtggaaattgttggtttagctgggcttatcgacgtccccgaggtggccgac
atgatcgcagttgcggcgatgctgattagacctcaagacacgcaatctgcgctgcggatc
ttagccggtccgcacgtggggctgggagcagcggatattctagcgctggctaatcgtgcg
gctaacctagctggacgtggaaaagacgatagagaagagaaaaaaactgatccacttgag
cgtctggaacaaataatcgcagaaactttgcctaaggcgccggaagcagttgtgggactg
gcagaggccgtcgctgaccttgatgcgccgagagaagaggacagttcaactcgctatagc
gatgaggggctgcggaggctgcgcttgctggcatccgaattgaggtatctgcgtacccat
agcttggggcactcattgccggatctttttgcagatatcgagcgagtattcgggattcgt
accgaagtgctacaacgagaagaccctcatgacgacggagccccggggactgcacatctt
gatcgttttgcagaggtcgtctcggattttgctcgggttccccatgccacactgagccag
tttttggattaccttgagctcagtagaagccatgaggacggcctagaacccggcgaggtg
caggttcgttctgaccgtgttcagattcttactgtgcataaagctaaaggcttggagtgg
cagatcgtgagcgttgcgcatgcagattccagcacctataagacaagaacgtcgacatgg
ctgagcaacgagtccgccgtgccatcggcgcttcgcggagacgcacgagaagacgactct
ttggtgggagctcctgtttggtatatcgattccccagaatccccagctgatctgaaaaag
cagggagacgcccacattgcagaatttcgggctgtggaggaagaagagaatgcgcggttg
ttctatgtggcattgacccgtgcagaggaacgcgtactggttacagcatcaacggatatc
accaaggcttcccctccggggccttacacacatcttgaaatgttgcgcactaaagtgcca
gactccgtggtggagtggtttgacggcgataccgatgatgccctcgaacctcctcttcca
gaaactggagttttcccccaagagttgcggcccgagggagtagatgcggtcaagaaagcc
atggtggagcttcctgcgctgataaaagatggagatctttttgagcgatgggaacaagag
gtcaccgcgcttatcgaggaacatcagcagctgagcactccggttgtgcctgtggaatta
ggccttgagcttacggcctcggacatcgtgaacctttcgcaggatccccaagcttttgct
agacgacgtcgccggccagttcctttcaaacccaatagctatgccaaacgcggaactgct
ttccaccagtggcttgaagaccgttttggtgccacggctttgttggacgctgaggagctt
cctggtatcgatgatgccctggatggaacagaattggagactttgaaagcccgatttttg
gacagcgagtgggcggaccgaactcctgaatatgtggagcatccgtttgaagtgtctatc
ggcgagcatatagtccgaggacgtatggacgctgtgtttaagaacgcagatggacaatgg
attgttgttgactggaagacaggacagccgccggcagaagccgcggagcgtcgttctgta
tcgctgcagctggcagtgtaccgattagcgtgggctcgattgcgaggtgttgacccgtca
gaagtacaagcgttattccattatgtggggcgtaattttagttatcagcccagcgagctt
ccggatgaggcgtcgttagctcacatgcttacgttgaacatgtaa
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