Corynebacterium ulcerans 210932: Cul210932_0721
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Entry
Cul210932_0721 CDS
T03406
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cun
Corynebacterium ulcerans 210932
Pathway
cun03420
Nucleotide excision repair
cun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cul210932_0721 (pcrA)
03430 Mismatch repair
Cul210932_0721 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cun03400
]
Cul210932_0721 (pcrA)
Enzymes [BR:
cun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cul210932_0721 (pcrA)
DNA repair and recombination proteins [BR:
cun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul210932_0721 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Cul210932_0721 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DEAD
ResIII
OstA_2
Motif
Other DBs
NCBI-ProteinID:
AIT88679
LinkDB
All DBs
Position
740566..743133
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AA seq
855 aa
AA seq
DB search
MNNSDNFPTQQGFDFGDWAGEWATATKTPAESSPFSTQAQSPAANQSPAQTTDKPAASLS
ETSVPVMADDLVQGLNPQQQQAVEHSGSPLLIVAGAGSGKTAVLTRRIAYLMRIRGVQPG
QILAITFTNKAAAEMRERVAHLVGPIANRMWVSTFHSTCVRILREQAQLVAGLNTNFTIY
DSDDSKRLLAMISKDMNLDIKKFTPRLLGAGISNLKNELISPETAVSEAESTKNPYETTV
AAVYVEYQRRLRQANAVDFDDLIGETVRIFQEHPQVTEYYRRRFRHVLIDEYQDTNHAQY
VLIHELVGKGPTASELCVVGDSDQSIYAFRGATIRNIEEFERDYPDATTVLLEQNYRSTQ
TILSAANSVISQNENRRKKKLWTALGRGEPIAGYVADNEHDEARFIAQEIDALADKGVDY
SDIAIMYRTNNSSRAVEDVFMRSGIPYKVVGGTRFYERKEIRDVIAYLRLLDNPEDTVSL
RRIINTPRRGIGDKAVAFLTLHSENQGVSFQQALIDAAAGQISLLGARGRNAISGFVDMM
AGLRTSAAESVNEITGMPDIGDVISQILDITGYKAELEKSNDPQDGARLDNLNELVSVAR
EFSSEAANQVAYAKMDGGELEDLGGQGEPEPGSLQAFLERVSLVADADQIPDNEQGLVTL
MTLHTAKGLEFPVVFLMGWEDGQFPHLRALGDPKELAEERRLAYVGITRARKTLYITRAM
LRSSWGNPVTNPASRFLTEIPEDLLDWRREEPENSFDSWGQPSWGRNTGFGSSRGDSWGS
PRYGATPKPKKTIPSYTKNSDLSLVVGDRVNHDKYGLGTVTKVDKGSPADSVTIDFGSSG
TVRLMLIGSVPMEKL
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaataactcggacaattttcctacccaacaaggttttgacttcggcgattgggccggt
gagtgggccaccgccacaaagacaccagctgagtcgtctccgtttagcactcaagcccag
agccctgcagcaaatcagtctccggctcaaacaacggacaagcctgccgccagcttgtct
gagaccagcgtgcctgtgatggctgatgatctcgtgcagggacttaatccacagcaacag
caggcagtagagcacagcggatcaccgcttcttatcgtggctggtgcaggttctggcaag
acagcagtgctcacacgtcgtatcgcttatctcatgcgcatacggggcgtgcagccagga
cagatcctagctattacgtttaccaataaagctgcggctgagatgcgagagcgcgtggct
caccttgtggggccaatcgccaacagaatgtgggtgtctaccttccactccacctgcgta
cgcatcttgcgggaacaagcccagttggtcgctggattaaataccaacttcactatctat
gactcggatgattcgaagcgcttgcttgcgatgatctccaaggacatgaacttagacatc
aagaagttcacaccgcggttattgggggcgggaatctccaacctcaaaaatgagctgatt
tctcccgagaccgcagtctcagaagccgaaagcacaaagaacccgtatgagacaacggtg
gctgccgtatacgtcgagtatcagcgacgtttaaggcaagcaaatgccgtcgattttgat
gacctcatcggagagacagtccgtattttccaagagcacccacaagtgaccgagtattac
aggcgcagattccgtcatgtgcttatcgacgaataccaggacactaaccacgcacaatac
gtgctcattcatgagctggtaggcaaaggcccaacggccagcgaactatgcgttgtcgga
gactcagatcagtccatttacgccttccgtggcgcgactatccgcaatattgaggaattt
gagcgggattatcccgatgccacgactgtgctcttggaacagaattaccggtcaacgcag
acgattctcagcgcagctaactcggtgatctcccaaaacgagaaccgaagaaaaaagaaa
ctgtggacagccctaggccgcggagagcccatcgccggatatgttgcggataacgagcat
gatgaggcccgttttattgctcaagaaatagacgcgctcgcggataaaggcgtggattac
agcgacatagccatcatgtatcgcacaaataactcgtctcgtgcagtggaagacgtcttt
atgcgttctggtatcccttataaagttgtggggggaacccgcttctacgagcgcaaagag
attcgggatgtcatcgcctacctacggttattggataacccagaggacacagtctctctc
cgcaggattatcaacactccacgccgaggcatcggcgacaaagcggtagcgttcctcact
ctgcattcagagaaccaaggtgtgagcttccaacaagcgcttatcgacgctgccgcaggg
cagataagccttttaggggcacgcgggcgcaatgcgatttccgggttcgttgacatgatg
gctgggttgcggacttctgcagccgaatccgtcaatgagatcaccgggatgccggatatt
ggtgatgtgatttctcaaatacttgatatcacggggtataaagcggagctggaaaagagc
aacgacccacaagacggcgcacggttggacaaccttaacgagcttgtctctgtcgcacga
gaattttcctcggaagcagccaatcaggtggcctatgccaagatggacggcggtgaactc
gaagacttaggaggccaaggcgaaccagaacctggtagtttgcaggccttcctagagcga
gtctcccttgtggctgatgccgaccaaatccccgataatgagcaaggattggtcaccctt
atgacgctgcatacagccaagggactggagtttccggttgtctttcttatggggtgggaa
gatggccaattcccgcacttgcgcgcacttggggaccccaaggaactagcggaggaacgt
cggcttgcttatgtcggaataacacgagcacgcaagaccctctacatcacccgagctatg
ctgcgttcttcttggggaaatcccgttactaacccggcatcgaggttcctgacggaaatc
cccgaggaccttcttgactggcggcgcgaagaaccagaaaactctttcgactcatggggg
cagccttcctgggggagaaacacaggttttggttcttcacgcggcgactcgtggggatcg
ccacggtatggcgctactccgaagcctaagaagacaataccaagctatacaaagaacagc
gatctttcattggtcgtcggagatcgggtgaaccacgataaatatggtttgggcaccgta
accaaggttgataaaggtagtccggcggattccgtaactattgattttggttcttctgga
acagtgcggcttatgctgatcggctcagtcccgatggaaaaactttaa
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